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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • plastid 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G317400.1 Wheat nucleus 96.0 96.0
TraesCS5A01G310100.1 Wheat nucleus 84.36 86.25
TraesCS5A01G310700.1 Wheat nucleus 67.64 83.78
TraesCS5A01G310200.1 Wheat nucleus 60.36 78.3
TraesCS5A01G310800.1 Wheat nucleus 53.45 68.06
TraesCS5A01G311300.1 Wheat nucleus 51.27 66.51
TraesCS5A01G311000.1 Wheat nucleus 47.27 59.09
TraesCS5A01G310600.1 Wheat nucleus 47.27 57.78
TraesCS5A01G310400.1 Wheat nucleus 47.27 56.52
TraesCS5B01G311300.1 Wheat nucleus 58.91 55.86
TraesCS5A01G311700.1 Wheat nucleus 36.73 43.35
TraesCS6A01G256900.1 Wheat nucleus 32.36 41.01
AT1G63030.2 Thale cress nucleus 26.91 40.88
Bra027612.1-P Field mustard nucleus 27.27 40.54
CDY49205 Canola nucleus 27.27 40.54
Solyc03g026270.1.1 Tomato nucleus 30.18 40.49
TraesCS5A01G311100.1 Wheat nucleus 34.18 40.17
PGSC0003DMT400037122 Potato nucleus 31.64 40.09
TraesCS2A01G399500.1 Wheat nucleus, plastid 31.64 39.91
TraesCS5A01G310000.1 Wheat plastid 35.64 39.68
Solyc03g026280.2.1 Tomato nucleus 30.18 39.52
KRH35383 Soybean nucleus 29.45 39.51
AT4G25490.1 Thale cress nucleus 30.55 39.44
TraesCS5A01G311900.1 Wheat nucleus 34.18 39.33
TraesCS6A01G186400.1 Wheat plastid 33.82 39.24
KRG91437 Soybean nucleus 29.45 39.13
TraesCS5A01G312000.1 Wheat plastid 34.18 38.84
CDY66018 Canola nucleus 30.18 38.78
TraesCS6A01G381200.1 Wheat plastid 34.55 38.78
CDX92710 Canola nucleus 30.18 38.6
TraesCS5A01G311800.1 Wheat plastid 34.18 38.52
AT4G25480.1 Thale cress nucleus 30.18 38.43
TraesCS5A01G311600.1 Wheat nucleus 34.18 38.37
Bra022770.1-P Field mustard nucleus 29.82 38.32
CDX84868 Canola nucleus 29.82 38.32
CDY52356 Canola nucleus 30.18 38.25
TraesCS5A01G311500.1 Wheat nucleus, plastid 33.09 38.24
TraesCS6A01G381000.1 Wheat nucleus 34.18 38.21
CDY00510 Canola nucleus 30.55 38.18
Bra028290.1-P Field mustard nucleus 30.55 38.18
CDY71145 Canola nucleus 28.0 38.12
Bra016763.1-P Field mustard nucleus 28.0 38.12
AT4G25470.1 Thale cress nucleus 29.82 37.96
Bra019777.1-P Field mustard nucleus 28.36 37.86
Bra019162.1-P Field mustard nucleus 29.45 37.85
CDY70584 Canola nucleus 29.45 37.85
CDY31925 Canola nucleus 30.18 37.73
PGSC0003DMT400037119 Potato mitochondrion 16.73 37.7
CDY57075 Canola nucleus 28.36 37.68
VIT_16s0100g00380.t01 Wine grape nucleus 29.82 37.61
AT5G51990.1 Thale cress nucleus 30.55 37.5
TraesCS7A01G057800.1 Wheat nucleus, plastid 28.36 37.14
CDY52360 Canola nucleus 29.82 37.1
CDY65499 Canola nucleus 29.09 37.04
TraesCS5A01G310900.1 Wheat mitochondrion 23.64 36.93
Solyc03g124110.1.1 Tomato nucleus 29.45 36.82
CDY16016 Canola nucleus 26.91 36.82
CDY31270 Canola nucleus 26.91 36.63
TraesCS4A01G433300.1 Wheat nucleus 28.73 36.57
AT1G12610.1 Thale cress nucleus 27.64 36.36
Bra026963.1-P Field mustard nucleus 26.91 36.1
CDY26574 Canola nucleus 26.91 36.1
Solyc12g056430.1.1 Tomato nucleus 25.82 34.98
VIT_02s0025g04460.t01 Wine grape nucleus 29.82 34.89
TraesCS7A01G057700.1 Wheat nucleus 28.36 34.67
OQU89795 Sorghum mitochondrion, nucleus 42.18 34.63
PGSC0003DMT400010876 Potato nucleus 25.82 34.3
PGSC0003DMT400037120 Potato nucleus 29.09 33.9
TraesCS4A01G433200.1 Wheat nucleus 28.0 33.77
CDY52358 Canola nucleus 22.91 33.33
PGSC0003DMT400037118 Potato mitochondrion 15.64 33.08
CDY66013 Canola nucleus 22.91 32.98
KRH09144 Soybean nucleus 27.64 32.9
PGSC0003DMT400037121 Potato nucleus 30.55 32.56
KRH77483 Soybean nucleus 26.18 31.86
Bra010461.1-P Field mustard nucleus 29.82 31.78
KRH57258 Soybean nucleus 28.36 30.71
Solyc08g007830.1.1 Tomato nucleus 25.09 30.13
PGSC0003DMT400032622 Potato nucleus 25.82 29.83
Bra010460.1-P Field mustard nucleus 29.82 29.82
PGSC0003DMT400032621 Potato nucleus 25.82 29.1
KRH03987 Soybean nucleus 26.91 29.02
Bra010463.1-P Field mustard nucleus 23.64 29.02
Solyc08g007820.1.1 Tomato nucleus 25.45 28.69
PGSC0003DMT400032623 Potato nucleus 25.45 28.11
PGSC0003DMT400006896 Potato cytosol 12.0 24.63
KRH38616 Soybean plastid 28.73 24.16
PGSC0003DMT400090651 Potato nucleus 28.0 23.4
Protein Annotations
Gene3D:3.30.730.10MapMan:35.1InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31839PANTHER:PTHR31839:SF9SMART:SM00380
SUPFAM:SSF54171EnsemblPlantsGene:TraesCS5A01G310500EnsemblPlants:TraesCS5A01G310500.1TIGR:cd00018SEG:seg:
Description
No Description!
Coordinates
chr5A:+:522223600..522224779
Molecular Weight (calculated)
29236.1 Da
IEP (calculated)
8.100
GRAVY (calculated)
0.062
Length
275 amino acids
Sequence
(BLAST)
001: MDVADAASSS GQEQQGHRTV SSEPPKRPAG RTKVHETRHP LYRGVRQRGR VGQWVCEVRV PGVKGSRLWL GTFATAEMAA RAHDAAVLAL SGRAACLNFA
101: DSAWRMLPVL AAGSFGFGSA REIKAAVAVA VVAFQKEQII PVAVAVVALQ KQQIIPVAVA VVALQKQQIP VAVALVALQE QQVPVAVAVV ALHRQQVPVA
201: CPATSGPGSA LFYMSSSDLL ELDEEQWFGG MEAGSYYASL AQGMLVAPPD ERARPEDGEQ SGVQTPLWSQ SHLFN
Best Arabidopsis Sequence Match ( AT4G25470.1 )
(BLAST)
001: MNSFSAFSEM FGSDYESPVS SGGDYSPKLA TSCPKKPAGR KKFRETRHPI YRGVRQRNSG KWVCELREPN KKTRIWLGTF QTAEMAARAH DVAAIALRGR
101: SACLNFADSA WRLRIPESTC AKEIQKAAAE AALNFQDEMC HMTTDAHGLD MEETLVEAIY TPEQSQDAFY MDEEAMLGMS SLLDNMAEGM LLPSPSVQWN
201: YNFDVEGDDD VSLWSY
Arabidopsis Description
DREB1CC-repeat binding factor 2 [Source:UniProtKB/TrEMBL;Acc:B2BIW9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.