Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G138200.2 | Wheat | plastid | 99.8 | 99.8 |
| TraesCSU01G003200.1 | Wheat | plastid | 99.41 | 99.41 |
| HORVU1Hr1G034070.1 | Barley | nucleus, plastid | 79.29 | 97.57 |
| Os10t0415900-01 | Rice | nucleus, plastid | 90.14 | 89.43 |
| OQU91781 | Sorghum | plastid | 88.56 | 87.18 |
| Zm00001d014175_P004 | Maize | plastid | 88.36 | 80.43 |
| GSMUA_Achr8P04400_001 | Banana | plastid | 69.03 | 65.3 |
| VIT_07s0141g00150.t01 | Wine grape | cytosol | 40.04 | 64.65 |
| KRH67282 | Soybean | nucleus | 66.08 | 61.69 |
| KRG95607 | Soybean | plastid | 65.29 | 61.3 |
| VIT_07s0141g00140.t01 | Wine grape | plastid | 63.31 | 59.33 |
| Solyc10g045390.1.1 | Tomato | nucleus | 4.73 | 58.54 |
| Solyc10g045400.1.1 | Tomato | nucleus | 46.35 | 58.17 |
| CDX78250 | Canola | cytosol, nucleus, plastid | 7.5 | 57.58 |
| CDY13219 | Canola | nucleus, plastid | 58.58 | 56.79 |
| CDX76140 | Canola | plastid | 58.19 | 56.19 |
| Bra014800.1-P | Field mustard | plastid | 58.19 | 56.19 |
| AT3G54610.1 | Thale cress | plastid | 62.92 | 56.16 |
| CDY64337 | Canola | plastid | 60.35 | 55.84 |
| Bra014803.1-P | Field mustard | plastid | 60.16 | 55.66 |
| CDY55833 | Canola | plastid | 60.35 | 55.64 |
| Bra007082.1-P | Field mustard | nucleus | 24.46 | 48.06 |
| CDX78249 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 9.07 | 38.98 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.3.4.1.1 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:Bromodomain | InterPro:Bromodomain-like_sf |
| InterPro:Bromodomain_CS | InterPro:GCN5 | InterPro:GNAT_dom | GO:GO:0000003 | GO:GO:0000123 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009653 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010015 | GO:GO:0010321 | GO:GO:0010484 |
| GO:GO:0016043 | GO:GO:0016407 | GO:GO:0016573 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000182 |
| InterPro:IPR001487 | InterPro:IPR036427 | PFAM:PF00439 | PFAM:PF00583 | PRINTS:PR00503 | ScanProsite:PS00633 |
| PFscan:PS50014 | PFscan:PS51186 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF124 | SMART:SM00297 | SUPFAM:SSF47370 |
| SUPFAM:SSF55729 | EnsemblPlantsGene:TraesCS1D01G134200 | EnsemblPlants:TraesCS1D01G134200.1 | TIGR:cd04301 | TIGR:cd05509 | SEG:seg |
Description
No Description!
Coordinates
chr1D:-:166822854..166847456
Molecular Weight (calculated)
56475.1 Da
IEP (calculated)
6.708
GRAVY (calculated)
-0.645
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGLAAPSPS HSGATSGGGA SHRKRKLPPP SLSDATADED DDTTAPSSPA TSLSSPSRPS SPSSSHSDED DDDSLTTFTA ARLDAAPASS SGRPPKPDSS
101: SASAVTAAAP KPDAASAAAG DGKEDSKGLF TDNIQTSGAY SAREEGLKRE EDTGKLKFLC YSNDGVDEHM IWLVGLKNIF ARQLPNMPKE YIVRLVMDRT
201: HKSMMVIRNN NVVGGITYRP YASQRFGEIA FCAITADEQV KGYGTRLMNH LKQHARDADG LTHFLTYADN NAVGYFVKQG FTKEITFDKE RWQGYIKDYD
301: GGILMECKID QKLPYVDLAT MIRHQRQAID EKIRELSNCH IVYSGIDFQK KEAGIPRRLM KPEDIPGLRE AGWTPDQWGH SKSRSTFSSD YNTYRQQLTS
401: LMRMLLKSLV DHADAWPFKE PVDSRDVPDY YDIIKDPIDL KTMSRRVESE QYYVTLEMFV ADLKRMFINA RTYNSPDTIY FKCSTRLEAY FTNRIQSHLA
501: QAASTKN
101: SASAVTAAAP KPDAASAAAG DGKEDSKGLF TDNIQTSGAY SAREEGLKRE EDTGKLKFLC YSNDGVDEHM IWLVGLKNIF ARQLPNMPKE YIVRLVMDRT
201: HKSMMVIRNN NVVGGITYRP YASQRFGEIA FCAITADEQV KGYGTRLMNH LKQHARDADG LTHFLTYADN NAVGYFVKQG FTKEITFDKE RWQGYIKDYD
301: GGILMECKID QKLPYVDLAT MIRHQRQAID EKIRELSNCH IVYSGIDFQK KEAGIPRRLM KPEDIPGLRE AGWTPDQWGH SKSRSTFSSD YNTYRQQLTS
401: LMRMLLKSLV DHADAWPFKE PVDSRDVPDY YDIIKDPIDL KTMSRRVESE QYYVTLEMFV ADLKRMFINA RTYNSPDTIY FKCSTRLEAY FTNRIQSHLA
501: QAASTKN
001: MDSHSSHLNA ANRSRSSQTP SPSHSASASV TSSLHKRKLA ATTAANAAAS EDHAPPSSSF PPSSFSADTR DGALTSNDEL ESISARGADT DSDPDESEDI
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
Arabidopsis Description
HAG1Histone acetyltransferase GCN5 [Source:UniProtKB/Swiss-Prot;Acc:Q9AR19]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.