Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G54610.1 | KRH11557 | AT4G16420.1 | 16603259 |
AT3G54610.1 | KRH36579 | AT4G16420.1 | 16603259 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH67282 | Soybean | nucleus | 96.85 | 96.32 |
Solyc10g045390.1.1 | Tomato | nucleus | 6.48 | 85.37 |
Solyc10g045400.1.1 | Tomato | nucleus | 58.52 | 78.22 |
VIT_07s0141g00140.t01 | Wine grape | plastid | 77.96 | 77.82 |
AT3G54610.1 | Thale cress | plastid | 76.85 | 73.06 |
CDY64337 | Canola | plastid | 71.67 | 70.62 |
Bra014803.1-P | Field mustard | plastid | 71.48 | 70.44 |
CDY55833 | Canola | plastid | 71.3 | 70.0 |
GSMUA_Achr8P04400_001 | Banana | plastid | 69.07 | 69.59 |
CDY13219 | Canola | nucleus, plastid | 66.85 | 69.02 |
Bra014800.1-P | Field mustard | plastid | 67.04 | 68.95 |
CDX76140 | Canola | plastid | 66.85 | 68.76 |
Os10t0415900-01 | Rice | nucleus, plastid | 62.41 | 65.95 |
TraesCS1A01G138200.2 | Wheat | plastid | 61.48 | 65.48 |
TraesCSU01G003200.1 | Wheat | plastid | 61.48 | 65.48 |
TraesCS1D01G134200.1 | Wheat | plastid | 61.3 | 65.29 |
OQU91781 | Sorghum | plastid | 61.67 | 64.66 |
HORVU1Hr1G034070.1 | Barley | nucleus, plastid | 47.96 | 62.86 |
CDX78250 | Canola | cytosol, nucleus, plastid | 7.59 | 62.12 |
Zm00001d014175_P004 | Maize | plastid | 60.93 | 59.07 |
Bra007082.1-P | Field mustard | nucleus | 25.37 | 53.1 |
CDX78249 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.0 | 45.76 |
Protein Annotations
Gene3D:1.20.920.10 | EntrezGene:100791610 | MapMan:15.3.4.1.1 | Gene3D:3.40.630.30 | EMBL:ACUP02012120 | InterPro:Acyl_CoA_acyltransferase |
InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | InterPro:GCN5 | EnsemblPlantsGene:GLYMA_19G160700 | InterPro:GNAT_dom |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 |
GO:GO:0008080 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016573 |
GO:GO:0016740 | GO:GO:0019538 | UniProt:I1N9L6 | InterPro:IPR000182 | InterPro:IPR001487 | InterPro:IPR036427 |
EnsemblPlants:KRG95607 | ProteinID:KRG95607 | ProteinID:KRG95607.1 | PFAM:PF00439 | PFAM:PF00583 | PRINTS:PR00503 |
ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS51186 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF124 | SMART:SM00297 |
SUPFAM:SSF47370 | SUPFAM:SSF55729 | UniParc:UPI0001FBDA8F | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr19:+:42137767..42145132
Molecular Weight (calculated)
60454.8 Da
IEP (calculated)
6.358
GRAVY (calculated)
-0.638
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHGGGPLR SRSSQSPSPS HSASASATSS IHKRKLASED HAPPFPPSSF SADTRDGALT SNDDLESISA RGADSDSDDD SEDAVVDDDE DDYGNDNDSS
101: IRTFTASRLS NPPSAPRNTK LKTEISTVKI ENSDGAKDAV VGACAAASAG SVPGIVVKED PTKIFTDNLQ TSGAYTAREE SLKKEEEAGR LKFVCLSNDG
201: VDEHMVWLIG LKNIFARQLP NMPKEYIVRL VMDRSHKSVM VIRRNHVVGG ITYRPYASQK FGEIAFCAIT ADEQVKGYGT RLMNHLKQYA RDMDGLTHFL
301: TYADNNAVGY FIKQGFTKEI HLEKDRWQGY IKDYDGGILM ECKIDPKLPY TDLSTMIRRQ RQAIDEKIRE LSNCHIVYAG IDFQKKEAGI PKKIIDDIPG
401: LREAGWTPDQ WGHSRFRTLN VSTDNATNQK HLNGFMRSLL KSMFDHADAW PFKEPVDARD VPDYYDIIKD PMDLKTMSKR VDSEQYYVTF EMFVADARRM
501: FANARTYNSP ETIYYKCSTR LEAHFQSKVQ AGLQPGTKIQ
101: IRTFTASRLS NPPSAPRNTK LKTEISTVKI ENSDGAKDAV VGACAAASAG SVPGIVVKED PTKIFTDNLQ TSGAYTAREE SLKKEEEAGR LKFVCLSNDG
201: VDEHMVWLIG LKNIFARQLP NMPKEYIVRL VMDRSHKSVM VIRRNHVVGG ITYRPYASQK FGEIAFCAIT ADEQVKGYGT RLMNHLKQYA RDMDGLTHFL
301: TYADNNAVGY FIKQGFTKEI HLEKDRWQGY IKDYDGGILM ECKIDPKLPY TDLSTMIRRQ RQAIDEKIRE LSNCHIVYAG IDFQKKEAGI PKKIIDDIPG
401: LREAGWTPDQ WGHSRFRTLN VSTDNATNQK HLNGFMRSLL KSMFDHADAW PFKEPVDARD VPDYYDIIKD PMDLKTMSKR VDSEQYYVTF EMFVADARRM
501: FANARTYNSP ETIYYKCSTR LEAHFQSKVQ AGLQPGTKIQ
001: MDSHSSHLNA ANRSRSSQTP SPSHSASASV TSSLHKRKLA ATTAANAAAS EDHAPPSSSF PPSSFSADTR DGALTSNDEL ESISARGADT DSDPDESEDI
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
Arabidopsis Description
HAG1Histone acetyltransferase GCN5 [Source:UniProtKB/Swiss-Prot;Acc:Q9AR19]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.