Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014803.1-P | Field mustard | plastid | 82.22 | 85.22 |
| CDY64337 | Canola | plastid | 82.22 | 85.22 |
| CDY55833 | Canola | plastid | 82.04 | 84.73 |
| CDY13219 | Canola | nucleus, plastid | 75.35 | 81.84 |
| Bra014800.1-P | Field mustard | plastid | 75.0 | 81.14 |
| CDX76140 | Canola | plastid | 74.82 | 80.95 |
| KRG95607 | Soybean | plastid | 73.06 | 76.85 |
| KRH67282 | Soybean | nucleus | 72.54 | 75.87 |
| CDX78250 | Canola | cytosol, nucleus, plastid | 8.8 | 75.76 |
| Solyc10g045390.1.1 | Tomato | nucleus | 5.46 | 75.61 |
| Solyc10g045400.1.1 | Tomato | nucleus | 52.46 | 73.76 |
| VIT_07s0141g00140.t01 | Wine grape | plastid | 68.84 | 72.27 |
| GSMUA_Achr8P04400_001 | Banana | plastid | 62.32 | 66.04 |
| Os10t0415900-01 | Rice | nucleus, plastid | 57.39 | 63.8 |
| TraesCS1A01G138200.2 | Wheat | plastid | 56.16 | 62.92 |
| TraesCS1D01G134200.1 | Wheat | plastid | 56.16 | 62.92 |
| TraesCSU01G003200.1 | Wheat | plastid | 56.16 | 62.92 |
| OQU91781 | Sorghum | plastid | 56.51 | 62.33 |
| Bra007082.1-P | Field mustard | nucleus | 27.46 | 60.47 |
| HORVU1Hr1G034070.1 | Barley | nucleus, plastid | 43.84 | 60.44 |
| Zm00001d014175_P004 | Maize | plastid | 55.11 | 56.19 |
| CDX78249 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.39 | 50.0 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.3.4.1.1 | Gene3D:3.40.630.30 | EntrezGene:824626 | UniProt:A0A178VL29 | ProteinID:AAK31321.1 |
| ProteinID:AEE79255.1 | EMBL:AF031958 | EMBL:AF037442 | EMBL:AF338768 | ArrayExpress:AT3G54610 | EnsemblPlantsGene:AT3G54610 |
| RefSeq:AT3G54610 | TAIR:AT3G54610 | RefSeq:AT3G54610-TAIR-G | EnsemblPlants:AT3G54610.1 | TAIR:AT3G54610.1 | InterPro:Acyl_CoA_acyltransferase |
| Unigene:At.10490 | EMBL:BT002057 | EMBL:BT008909 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS |
| ProteinID:CAB77581.1 | InterPro:GCN5 | InterPro:GNAT_dom | GO:GO:0000003 | GO:GO:0000123 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 |
| GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008080 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009653 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010015 | GO:GO:0010321 | GO:GO:0010484 |
| GO:GO:0016043 | GO:GO:0016407 | GO:GO:0016569 | GO:GO:0016573 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0019538 | GO:GO:0043966 | GO:GO:0045893 | Symbol:HAT1 | InterPro:IPR000182 | InterPro:IPR001487 |
| InterPro:IPR036427 | RefSeq:NP_567002.1 | ProteinID:OAP06566.1 | PFAM:PF00439 | PFAM:PF00583 | PO:PO:0000005 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 |
| PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS51186 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF124 |
| UniProt:Q9AR19 | SMART:SM00297 | SUPFAM:SSF47370 | SUPFAM:SSF55729 | UniParc:UPI00000AC175 | SEG:seg |
Description
HAG1Histone acetyltransferase GCN5 [Source:UniProtKB/Swiss-Prot;Acc:Q9AR19]
Coordinates
chr3:+:20213406..20217653
Molecular Weight (calculated)
63127.0 Da
IEP (calculated)
6.417
GRAVY (calculated)
-0.581
Length
568 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSHSSHLNA ANRSRSSQTP SPSHSASASV TSSLHKRKLA ATTAANAAAS EDHAPPSSSF PPSSFSADTR DGALTSNDEL ESISARGADT DSDPDESEDI
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.