Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Bra012721.1-P | |
Bra040578.1-P |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G54610.1 | Bra012721.1-P | AT4G16420.1 | 16603259 |
AT3G54610.1 | Bra040578.1-P | AT4G16420.1 | 16603259 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY64337 | Canola | plastid | 99.64 | 99.64 |
Bra014800.1-P | Field mustard | plastid | 84.31 | 88.0 |
AT3G54610.1 | Thale cress | plastid | 85.22 | 82.22 |
Solyc10g045390.1.1 | Tomato | nucleus | 5.47 | 73.17 |
KRG95607 | Soybean | plastid | 70.44 | 71.48 |
KRH67282 | Soybean | nucleus | 69.89 | 70.53 |
Solyc10g045400.1.1 | Tomato | nucleus | 49.63 | 67.33 |
VIT_07s0141g00140.t01 | Wine grape | plastid | 66.06 | 66.91 |
GSMUA_Achr8P04400_001 | Banana | plastid | 62.04 | 63.43 |
Os10t0415900-01 | Rice | nucleus, plastid | 56.75 | 60.86 |
Bra007082.1-P | Field mustard | nucleus | 28.65 | 60.85 |
TraesCS1A01G138200.2 | Wheat | plastid | 55.66 | 60.16 |
TraesCS1D01G134200.1 | Wheat | plastid | 55.66 | 60.16 |
TraesCSU01G003200.1 | Wheat | plastid | 55.66 | 60.16 |
OQU91781 | Sorghum | plastid | 55.84 | 59.42 |
HORVU1Hr1G034070.1 | Barley | nucleus, plastid | 43.43 | 57.77 |
Zm00001d014175_P004 | Maize | plastid | 55.29 | 54.4 |
Protein Annotations
Gene3D:1.20.920.10 | MapMan:15.3.4.1.1 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | EnsemblPlantsGene:Bra014803 | EnsemblPlants:Bra014803.1 |
EnsemblPlants:Bra014803.1-P | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | InterPro:GCN5 | InterPro:GNAT_dom |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 |
GO:GO:0008080 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016573 |
GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000182 | InterPro:IPR001487 | InterPro:IPR036427 | UniProt:M4DE84 |
PFAM:PF00439 | PFAM:PF00583 | PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS51186 |
PANTHER:PTHR22880 | PANTHER:PTHR22880:SF124 | SMART:SM00297 | SUPFAM:SSF47370 | SUPFAM:SSF55729 | UniParc:UPI0002544EB8 |
SEG:seg | : | : | : | : | : |
Description
AT3G54610 (E=8e-206) HAT1, GCN5, HAG1, HAC3, HAG01, BGT | GCN5; DNA binding / H3 histone acetyltransferase/ histone acetyltransferase
Coordinates
chrA04:-:3267408..3271293
Molecular Weight (calculated)
60929.3 Da
IEP (calculated)
6.561
GRAVY (calculated)
-0.624
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSHSSHLNA ANRSRNSQTP SPSHSASASA SSSLHKRKLA ATTAANAAAS EDHAPPSASF PPSSNDDLES ISARGADSDS DPEESEDAVV DDDEEDFAPE
101: PDQDSSIRAF TAARLDSSSG ANGSSRSTKI KTEISTVKLE AGTVTAGVSS VSGIVPKDES AKTSTDDDVQ NCGAYIAREE ALRREEAANR LKFVCYSNDC
201: VDEHMMCLIG LKNIFARQLP NMPKEYIVRL LMDRKHKSVM VVRPPAGGNG ITHVVGGITY RPYHSQRFGE IAFCAITADE QVKGYGTRLM NHLKEHARNV
301: DGLTHFLTYA DNNAVGYFVK QGFTKEIYLE KDVWHGFIKD YDGGLLMECK IDPKLPYTNL SKMIRQQRKA IDERIRELSN CQNVYQVAEF QKKEGGSPKK
401: IRVEDIPGLR DAGWTPDQWG HTRYKLFSGS GDSVTKQKQL NALIRVLLKT MQDHSDAWPF KEPVDPLDVP DYYEIIKDPI DLKTIGKRVE SEQYYVTLDM
501: FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAA LQSGAKSQ
101: PDQDSSIRAF TAARLDSSSG ANGSSRSTKI KTEISTVKLE AGTVTAGVSS VSGIVPKDES AKTSTDDDVQ NCGAYIAREE ALRREEAANR LKFVCYSNDC
201: VDEHMMCLIG LKNIFARQLP NMPKEYIVRL LMDRKHKSVM VVRPPAGGNG ITHVVGGITY RPYHSQRFGE IAFCAITADE QVKGYGTRLM NHLKEHARNV
301: DGLTHFLTYA DNNAVGYFVK QGFTKEIYLE KDVWHGFIKD YDGGLLMECK IDPKLPYTNL SKMIRQQRKA IDERIRELSN CQNVYQVAEF QKKEGGSPKK
401: IRVEDIPGLR DAGWTPDQWG HTRYKLFSGS GDSVTKQKQL NALIRVLLKT MQDHSDAWPF KEPVDPLDVP DYYEIIKDPI DLKTIGKRVE SEQYYVTLDM
501: FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAA LQSGAKSQ
001: MDSHSSHLNA ANRSRSSQTP SPSHSASASV TSSLHKRKLA ATTAANAAAS EDHAPPSSSF PPSSFSADTR DGALTSNDEL ESISARGADT DSDPDESEDI
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
Arabidopsis Description
HAG1Histone acetyltransferase GCN5 [Source:UniProtKB/Swiss-Prot;Acc:Q9AR19]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.