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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • nucleus 3
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra012721.1-P
Bra040578.1-P

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64337 Canola plastid 99.64 99.64
Bra014800.1-P Field mustard plastid 84.31 88.0
AT3G54610.1 Thale cress plastid 85.22 82.22
Solyc10g045390.1.1 Tomato nucleus 5.47 73.17
KRG95607 Soybean plastid 70.44 71.48
KRH67282 Soybean nucleus 69.89 70.53
Solyc10g045400.1.1 Tomato nucleus 49.63 67.33
VIT_07s0141g00140.t01 Wine grape plastid 66.06 66.91
GSMUA_Achr8P04400_001 Banana plastid 62.04 63.43
Os10t0415900-01 Rice nucleus, plastid 56.75 60.86
Bra007082.1-P Field mustard nucleus 28.65 60.85
TraesCS1A01G138200.2 Wheat plastid 55.66 60.16
TraesCS1D01G134200.1 Wheat plastid 55.66 60.16
TraesCSU01G003200.1 Wheat plastid 55.66 60.16
OQU91781 Sorghum plastid 55.84 59.42
HORVU1Hr1G034070.1 Barley nucleus, plastid 43.43 57.77
Zm00001d014175_P004 Maize plastid 55.29 54.4
Protein Annotations
Gene3D:1.20.920.10MapMan:15.3.4.1.1Gene3D:3.40.630.30InterPro:Acyl_CoA_acyltransferaseEnsemblPlantsGene:Bra014803EnsemblPlants:Bra014803.1
EnsemblPlants:Bra014803.1-PInterPro:BromodomainInterPro:Bromodomain-like_sfInterPro:Bromodomain_CSInterPro:GCN5InterPro:GNAT_dom
GO:GO:0003674GO:GO:0003824GO:GO:0004402GO:GO:0005488GO:GO:0005515GO:GO:0006464
GO:GO:0008080GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016573
GO:GO:0016740GO:GO:0019538InterPro:IPR000182InterPro:IPR001487InterPro:IPR036427UniProt:M4DE84
PFAM:PF00439PFAM:PF00583PRINTS:PR00503ScanProsite:PS00633PFscan:PS50014PFscan:PS51186
PANTHER:PTHR22880PANTHER:PTHR22880:SF124SMART:SM00297SUPFAM:SSF47370SUPFAM:SSF55729UniParc:UPI0002544EB8
SEG:seg:::::
Description
AT3G54610 (E=8e-206) HAT1, GCN5, HAG1, HAC3, HAG01, BGT | GCN5; DNA binding / H3 histone acetyltransferase/ histone acetyltransferase
Coordinates
chrA04:-:3267408..3271293
Molecular Weight (calculated)
60929.3 Da
IEP (calculated)
6.561
GRAVY (calculated)
-0.624
Length
548 amino acids
Sequence
(BLAST)
001: MDSHSSHLNA ANRSRNSQTP SPSHSASASA SSSLHKRKLA ATTAANAAAS EDHAPPSASF PPSSNDDLES ISARGADSDS DPEESEDAVV DDDEEDFAPE
101: PDQDSSIRAF TAARLDSSSG ANGSSRSTKI KTEISTVKLE AGTVTAGVSS VSGIVPKDES AKTSTDDDVQ NCGAYIAREE ALRREEAANR LKFVCYSNDC
201: VDEHMMCLIG LKNIFARQLP NMPKEYIVRL LMDRKHKSVM VVRPPAGGNG ITHVVGGITY RPYHSQRFGE IAFCAITADE QVKGYGTRLM NHLKEHARNV
301: DGLTHFLTYA DNNAVGYFVK QGFTKEIYLE KDVWHGFIKD YDGGLLMECK IDPKLPYTNL SKMIRQQRKA IDERIRELSN CQNVYQVAEF QKKEGGSPKK
401: IRVEDIPGLR DAGWTPDQWG HTRYKLFSGS GDSVTKQKQL NALIRVLLKT MQDHSDAWPF KEPVDPLDVP DYYEIIKDPI DLKTIGKRVE SEQYYVTLDM
501: FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAA LQSGAKSQ
Best Arabidopsis Sequence Match ( AT3G54610.1 )
(BLAST)
001: MDSHSSHLNA ANRSRSSQTP SPSHSASASV TSSLHKRKLA ATTAANAAAS EDHAPPSSSF PPSSFSADTR DGALTSNDEL ESISARGADT DSDPDESEDI
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ
Arabidopsis Description
HAG1Histone acetyltransferase GCN5 [Source:UniProtKB/Swiss-Prot;Acc:Q9AR19]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.