Factsheet for Bra014800.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012721.1-P
Bra040578.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54610.1	Bra012721.1-P	AT4G16420.1	16603259
AT3G54610.1	Bra040578.1-P	AT4G16420.1	16603259

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76140	Canola	plastid	99.24	99.24
Bra014803.1-P	Field mustard	plastid	88.0	84.31
AT3G54610.1	Thale cress	plastid	81.14	75.0
KRG95607	Soybean	plastid	68.95	67.04
KRH67282	Soybean	nucleus	68.38	66.11
VIT_07s0141g00140.t01	Wine grape	plastid	65.52	63.59
Solyc10g045390.1.1	Tomato	nucleus	4.95	63.41
Solyc10g045400.1.1	Tomato	nucleus	48.38	62.87
Os10t0415900-01	Rice	nucleus, plastid	57.52	59.1
GSMUA_Achr8P04400_001	Banana	plastid	60.19	58.96
TraesCS1A01G138200.2	Wheat	plastid	56.19	58.19
TraesCS1D01G134200.1	Wheat	plastid	56.19	58.19
TraesCSU01G003200.1	Wheat	plastid	56.19	58.19
OQU91781	Sorghum	plastid	56.0	57.09
Bra007082.1-P	Field mustard	nucleus	28.0	56.98
HORVU1Hr1G034070.1	Barley	nucleus, plastid	44.38	56.55
Zm00001d014175_P004	Maize	plastid	55.81	52.6

Protein Annotations

Gene3D:1.20.920.10	MapMan:15.3.4.1.1	Gene3D:3.40.630.30	InterPro:Acyl_CoA_acyltransferase	EnsemblPlantsGene:Bra014800	EnsemblPlants:Bra014800.1
EnsemblPlants:Bra014800.1-P	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:Bromodomain_CS	InterPro:GCN5	InterPro:GNAT_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000182	InterPro:IPR001487	InterPro:IPR036427	UniProt:M4DE81
PFAM:PF00439	PFAM:PF00583	PRINTS:PR00503	ScanProsite:PS00633	PFscan:PS50014	PFscan:PS51186
PANTHER:PTHR22880	PANTHER:PTHR22880:SF124	SMART:SM00297	SUPFAM:SSF47370	SUPFAM:SSF55729	UniParc:UPI0002544EB5
SEG:seg	:	:	:	:	:

Description

AT3G54610 (E=6e-182) HAT1, GCN5, HAG1, HAC3, HAG01, BGT | GCN5; DNA binding / H3 histone acetyltransferase/ histone acetyltransferase

Coordinates

chrA04:+:3234666..3238484

Molecular Weight (calculated)

59012.3 Da

IEP (calculated)

6.658

GRAVY (calculated)

-0.619

Length

525 amino acids

Sequence
(BLAST)

001: MDSHSSHLNA ANRSRSSQTP SPSHSASASS SLHKRKLAAS EDHAPPSTSF PPSSNDDLES LSAARGADSG SDPDESEYAV HDGYEEDFAP EPDHDSSIRT
101: FTAARLDVNG SSRNAKIKTE EISTVELQAG TGTAGAIAPK DEAAKILTCG AYIAREEALR REEEAGRLKF VCYSNDGVDD HMMCLIGLKN IFARQLPNMP
201: KEYIVRLLMD RKHKSVMVLR KNEVEGGIPL VVGGITYRPY HRQRFGEIAF CAISADEQVK GYGTRLMNHL KEHARDVDGL THFLTYADNN AVGYFLKQSF
301: TKEIYLEKDV WHGYIKDYDG VLLMECRIDP KLKYTNLSSM ISKQRKAIDE MIRELSNCQN VYQVAEFQKK EGGSSKNIRV EDIPGLRDAG WTPDQWGHTR
401: YTLFSGSGDS VTKQKQLNAL IRGLLKTMQD HSDAWPFKEP VDPLDVPDYY EFIKDPIDLK TIGKRVESEQ YYMTLDMFVA DTRRMFNNCR TYNSPDTVYY
501: RCATKLQAHF FSKVQAALQS GAKSQ

Best Arabidopsis Sequence Match ( AT3G54610.1 )
(BLAST)

001: MDSHSSHLNA ANRSRSSQTP SPSHSASASV TSSLHKRKLA ATTAANAAAS EDHAPPSSSF PPSSFSADTR DGALTSNDEL ESISARGADT DSDPDESEDI
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ

Arabidopsis Description

HAG1Histone acetyltransferase GCN5 [Source:UniProtKB/Swiss-Prot;Acc:Q9AR19]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.