Factsheet for GSMUA_Achr8P04400_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P20280_001
GSMUA_Achr4P19660_001
GSMUA_Achr6P00130_001
GSMUA_Achr6P13340_001
GSMUA_Achr7P05900_001
GSMUA_Achr8P11980_001
GSMUA_Achr8P16070_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54610.1	GSMUA_Achr6P00130_001	AT4G16420.1	16603259
AT3G54610.1	GSMUA_Achr10P...	AT4G25490.1	16603259
AT3G54610.1	GSMUA_Achr11P...	AT4G25490.1	16603259
AT3G54610.1	GSMUA_Achr2P20280_001	AT4G25490.1	16603259
AT3G54610.1	GSMUA_Achr4P19660_001	AT4G25490.1	16603259
AT3G54610.1	GSMUA_Achr6P13340_001	AT4G25490.1	16603259
AT3G54610.1	GSMUA_Achr7P05900_001	AT4G25490.1	16603259
AT3G54610.1	GSMUA_Achr8P11980_001	AT4G25490.1	16603259
AT3G54610.1	GSMUA_Achr8P16070_001	AT4G25490.1	16603259

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0415900-01	Rice	nucleus, plastid	66.42	69.67
KRH67282	Soybean	nucleus	70.34	69.43
TraesCSU01G003200.1	Wheat	plastid	65.49	69.23
TraesCS1A01G138200.2	Wheat	plastid	65.49	69.23
HORVU1Hr1G034070.1	Barley	nucleus, plastid	53.17	69.17
KRG95607	Soybean	plastid	69.59	69.07
TraesCS1D01G134200.1	Wheat	plastid	65.3	69.03
VIT_07s0141g00140.t01	Wine grape	plastid	69.4	68.76
OQU91781	Sorghum	plastid	65.67	68.35
Solyc10g045400.1.1	Tomato	nucleus	51.12	67.82
VIT_07s0141g00150.t01	Wine grape	cytosol	38.81	66.24
Zm00001d014175_P004	Maize	plastid	65.11	62.66
AT3G54610.1	Thale cress	plastid	66.04	62.32
CDY64337	Canola	plastid	63.62	62.23
Bra014803.1-P	Field mustard	plastid	63.43	62.04
CDY55833	Canola	plastid	63.62	62.0
CDY13219	Canola	nucleus, plastid	59.7	61.19
Solyc10g045390.1.1	Tomato	nucleus	4.66	60.98
CDX76140	Canola	plastid	59.14	60.38
Bra014800.1-P	Field mustard	plastid	58.96	60.19
CDX78250	Canola	cytosol, nucleus, plastid	6.72	54.55
Bra007082.1-P	Field mustard	nucleus	22.76	47.29
CDX78249	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.96	40.68

Protein Annotations

Gene3D:1.20.920.10	MapMan:15.3.4.1.1	Gene3D:3.40.630.30	InterPro:Acyl_CoA_acyltransferase	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
InterPro:Bromodomain_CS	ncoils:Coil	InterPro:GCN5	InterPro:GNAT_dom	GO:GO:0000003	GO:GO:0000123
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0006464	GO:GO:0007275	GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009416
GO:GO:0009628	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010015
GO:GO:0010321	GO:GO:0010484	GO:GO:0016043	GO:GO:0016407	GO:GO:0016573	GO:GO:0016740
GO:GO:0019538	GO:GO:0043966	EnsemblPlantsGene:GSMUA_Achr8G04400_001	EnsemblPlants:GSMUA_Achr8P04400_001	EnsemblPlants:GSMUA_Achr8T04400_001	InterPro:IPR000182
InterPro:IPR001487	InterPro:IPR036427	UniProt:M0TMJ3	PFAM:PF00439	PFAM:PF00583	PRINTS:PR00503
ScanProsite:PS00633	PFscan:PS50014	PFscan:PS51186	PANTHER:PTHR22880	PANTHER:PTHR22880:SF124	SMART:SM00297
SUPFAM:SSF47370	SUPFAM:SSF55729	UniParc:UPI00029502AF	SEG:seg	:	:

Description

Histone acetyltransferase GCN5 [Source:GMGC_GENE;Acc:GSMUA_Achr8G04400_001]

Coordinates

chr8:-:2930170..2942912

Molecular Weight (calculated)

60878.4 Da

IEP (calculated)

5.061

GRAVY (calculated)

-0.709

Length

536 amino acids

Sequence
(BLAST)

001: MDGHSAPVRS RSSQSPSPSH SASASASSSV HHKRKFPGAA ATAAPAPVPA PFALSDTGAL TSNDDLDSIS AREEEEEDDT EEEEEEADED EEEEEEEEEE
101: DNDSMRTFTA ARLENASAAG GSGNPRSTKP PKTENLTTKQ NPSSNVNLMP GIVVKEETVK SIFTENIQTS GAYIAREEGL KREEDAGRLK FLCYANDGVD
201: EHMIWLIGLK NIFARQLPNM PKEYIVRLVM DRSHKSMMVI RHNQVVGGIT YRPYISQRFG EIAFCAITAD EQVKGYGTRL MNHLKQHARD VDGLAYFLTY
301: ADNNAVGYFV KQGFTKEITL EKERWQGYIK DYDGGILMEC KIDPKLPYID LATMIRRQRQ AIDEKIRELS NCHIVYQGID FQKKEAGIPR KPIKVEDIPG
401: LKDAGWTPDQ WGHSKFKTTN ATERQQLNNF MRNLLKLMFE HPDAWPFKEP VDAREVPDYY DIIKDPMDLR TMSKRLESEQ YYVTFEMFVA DVKRMCANAR
501: TYNSPETIYY KCANRLENFF TSKAQAYLLQ ISNKSS

Best Arabidopsis Sequence Match ( AT3G54610.1 )
(BLAST)

001: MDSHSSHLNA ANRSRSSQTP SPSHSASASV TSSLHKRKLA ATTAANAAAS EDHAPPSSSF PPSSFSADTR DGALTSNDEL ESISARGADT DSDPDESEDI
101: VVDDDEDEFA PEQDQDSSIR TFTAARLDSS SGVNGSSRNT KLKTESSTVK LESSDGGKDG GSSVVGTGVS GTVGGSSISG LVPKDESVKV LAENFQTSGA
201: YIAREEALKR EEQAGRLKFV CYSNDSIDEH MMCLIGLKNI FARQLPNMPK EYIVRLLMDR KHKSVMVLRG NLVVGGITYR PYHSQKFGEI AFCAITADEQ
301: VKGYGTRLMN HLKQHARDVD GLTHFLTYAD NNAVGYFVKQ GFTKEIYLEK DVWHGFIKDY DGGLLMECKI DPKLPYTDLS SMIRQQRKAI DERIRELSNC
401: QNVYPKIEFL KNEAGIPRKI IKVEEIRGLR EAGWTPDQWG HTRFKLFNGS ADMVTNQKQL NALMRALLKT MQDHADAWPF KEPVDSRDVP DYYDIIKDPI
501: DLKVIAKRVE SEQYYVTLDM FVADARRMFN NCRTYNSPDT IYYKCATRLE THFHSKVQAG LQSGAKSQ

Arabidopsis Description

HAG1Histone acetyltransferase GCN5 [Source:UniProtKB/Swiss-Prot;Acc:Q9AR19]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.