Factsheet for HORVU5Hr1G095400.7

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G016540.1
HORVU1Hr1G034070.1
HORVU5Hr1G041600.1
HORVU5Hr1G080220.2
HORVU5Hr1G080230.1
HORVU5Hr1G080300.1
HORVU5Hr1G080310.1
HORVU5Hr1G080340.1
HORVU5Hr1G080350.1
HORVU5Hr1G080380.1
HORVU5Hr1G080400.1
HORVU5Hr1G080420.1
HORVU5Hr1G080430.1
HORVU5Hr1G080440.2
HORVU5Hr1G080450.1
HORVU6Hr1G065580.4
HORVU6Hr1G089320.1
HORVU7Hr1G010510.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G16420.1	HORVU1Hr1G034070.1	AT3G54610.1	16603259
AT4G16420.1	HORVU1Hr1G034070.1	AT3G54610.1	21798944
AT4G16420.1	HORVU0Hr1G016540.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G041600.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080220.2	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080230.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080300.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080310.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080340.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080350.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080380.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080400.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080420.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080430.1	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080440.2	AT4G25490.1	16603259
AT4G16420.1	HORVU5Hr1G080450.1	AT4G25490.1	16603259
AT4G16420.1	HORVU6Hr1G065580.4	AT4G25490.1	16603259
AT4G16420.1	HORVU6Hr1G089320.1	AT4G25490.1	16603259
AT4G16420.1	HORVU7Hr1G010510.2	AT4G25490.1	16603259

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G395200.1	Wheat	nucleus	93.31	98.15
TraesCS5D01G400100.2	Wheat	nucleus	98.06	98.06
TraesCS5A01G390300.2	Wheat	nucleus	98.06	98.06
Os03t0750800-01	Rice	nucleus	88.38	88.54
EER90868	Sorghum	nucleus	87.85	88.32
Zm00001d034033_P002	Maize	nucleus	87.5	87.96
Zm00001d013265_P003	Maize	nucleus	86.27	86.73
GSMUA_Achr6P00130_001	Banana	nucleus	72.89	72.13
VIT_00s0194g00130.t01	Wine grape	nucleus	60.04	60.89
KRH36579	Soybean	nucleus	58.1	59.57
KRH11557	Soybean	nucleus	57.39	58.84
CDY34465	Canola	nucleus	15.32	57.24
Solyc07g047610.2.1	Tomato	nucleus	56.16	56.96
VIT_12s0057g00920.t01	Wine grape	nucleus	57.22	56.92
CDX90526	Canola	nucleus	46.65	56.5
AT4G16420.1	Thale cress	nucleus	48.42	56.47
CDY42533	Canola	nucleus, plastid	48.24	56.38
CDY09696	Canola	nucleus	46.48	56.29
Bra012721.1-P	Field mustard	nucleus	46.48	56.29
Bra040578.1-P	Field mustard	nucleus	48.06	56.17
CDY69435	Canola	nucleus	47.89	55.97
Solyc05g054200.2.1	Tomato	nucleus	52.29	54.7
PGSC0003DMT400021785	Potato	nucleus	51.76	54.14
KRG90028	Soybean	nucleus	24.82	53.82
KRH17664	Soybean	nucleus	52.99	52.62
KRG90027	Soybean	nucleus	7.75	52.38
CDY35959	Canola	nucleus	47.54	48.82
CDY28021	Canola	nucleus	46.65	48.36
Bra029673.1-P	Field mustard	nucleus	46.65	48.27
AT3G07740.4	Thale cress	nucleus	46.48	47.57

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.10.780	MapMan:15.3.4.1.2	MapMan:15.5.2.2	Gene3D:3.30.60.90	InterPro:ADA2_plants
InterPro:Ada2/TADA2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003713	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0035065
GO:GO:0046872	GO:GO:1903508	EnsemblPlantsGene:HORVU5Hr1G095400	EnsemblPlants:HORVU5Hr1G095400.7	InterPro:Homeobox-like_sf	InterPro:IPR000433
InterPro:IPR007526	InterPro:IPR017884	UniProt:M0VNY2	PFAM:PF00249	PFAM:PF00569	PIRSF:PIRSF025024
ScanProsite:PS01357	PFscan:PS50135	PFscan:PS50934	PFscan:PS51293	PANTHER:PTHR12374	PANTHER:PTHR12374:SF39
InterPro:SANT/Myb	InterPro:SANT_dom	SMART:SM00291	SMART:SM00717	SUPFAM:SSF46689	SUPFAM:SSF57850
InterPro:SWIRM	UniParc:UPI000295132C	InterPro:Znf_ZZ	SEG:seg	:	:

Description

Transcriptional adapter [Source:UniProtKB/TrEMBL;Acc:M0VNY2]

Coordinates

chrchr5H:-:598229818..598234856

Molecular Weight (calculated)

63829.7 Da

IEP (calculated)

7.683

GRAVY (calculated)

-0.767

Length

568 amino acids

Sequence
(BLAST)

001: MGRSRGVPNS GDDDTNHRSK RRRVASTGDA SDSLSAACGG AGDGKKALYH CNYCNKDLSG KIRFKCSKCP DFDLCVECFS VGAEVQPHRS NHPYRVMDNL
101: SFPLICPDWN ADEEILLLEG IEMYGLGNWA EVAEHVGTKS KAQCIEHYTT AYMNSPCYPL PDMSHVNGKN RKELLAMAKV QGESKKGIPL LSGDLTPKAE
201: SPFSPSRVKM EDALGEGPAS RSPSHIPGGA NKKASTAGHF KDNSNLSKVE DGHMDRSIGV KKPRYSADEG PSLTELSGYN AKRHEFDPEY DNDAEQALAE
301: MEFKETDTET DRELKLRVLR IYLSRLDERK RRKEFILERN LLYPNPLEKD LTNEDKEVYH RYKVFMRFLS KEEHEALVRS VIEERKIRRR IQELQECRSA
401: GCRTLAEAKI HIEQKRRKEY EANALKAKES GQLISNSKSG HKTNRPMKVE TDGSLDLKKG SAILDAGGRD SPKSTGPTSA KQWDDWDIVG LPGAELLSVS
501: EKLLCCQNRL LPSHYLRMQE VLMQEMFKGN IVKKEDAHVL FKVDPAKVDT VYDMVTKKLG NNEEAPMV

Best Arabidopsis Sequence Match ( AT4G16420.1 )
(BLAST)

001: MGRSRGNFQN FEDPTQRTRK KKNAANVENF ESTSLVPGAE GGGKYNCDYC QKDITGKIRI KCAVCPDFDL CIECMSVGAE ITPHKCDHPY RVMGNLTFPL
101: ICPDWSADDE MLLLEGLEIY GLGNWAEVAE HVGTKSKEQC LEHYRNIYLN SPFFPLPDMS HVAGKNRKEL QAMAKGRIDD KKAEQNMKEE YPFSPPKVKV
201: EDTQKESFVD RSFGGKKPVS TSVNNSLVEL SNYNQKREEF DPEYDNDAEQ LLAEMEFKEN DTPEEHELKL RVLRIYSKRL DERKRRKEFI IERNLLYPNP
301: FEKDLSQEEK VQCRRLDVFM RFHSKEEHDE LLRNVVSEYR MVKRLKDLKE AQVAGCRSTA EAERYLGRKR KRENEEGMNR GKESGQFGQI AGEMGSRPPV
401: QASSSYVNDL DLIGFTESQL LSESEKRLCS EVKLVPPVYL QMQQVMSHEI FKGNVTKKSD AYSLFKIDPT KVDRVYDMLV KKGIAQL

Arabidopsis Description

ADA2BTranscriptional adapter ADA2b [Source:UniProtKB/Swiss-Prot;Acc:Q9ATB4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.