Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- extracellular 2
- plasma membrane 4
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0113g00470.t01 | Wine grape | plasma membrane | 27.57 | 23.92 |
| VIT_17s0000g06630.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.58 | 23.62 |
| VIT_14s0108g01250.t01 | Wine grape | plasma membrane | 18.94 | 17.59 |
Protein Annotations
| EntrezGene:100250739 | wikigene:100250739 | MapMan:35.2 | EMBL:AM477397 | ProteinID:CAN79522 | ProteinID:CAN79522.1 |
| ProteinID:CBI28090 | ProteinID:CBI28090.3 | UniProt:D7TBQ5 | EMBL:FN595756 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EntrezGene:LOC100250739 | wikigene:LOC100250739 | PANTHER:PTHR33133 | PANTHER:PTHR33133:SF9 | TMHMM:TMhelix |
| UniParc:UPI000198418B | ArrayExpress:VIT_11s0016g04110 | EnsemblPlantsGene:VIT_11s0016g04110 | EnsemblPlants:VIT_11s0016g04110.t01 | RefSeq:XP_002281196 | RefSeq:XP_002281196.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:3365564..3366469
Molecular Weight (calculated)
33701.5 Da
IEP (calculated)
9.582
GRAVY (calculated)
0.805
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRTTQVLE SIHLMNTAQI FREAIRIIFL HPTHFHSISI FLFSPLPISL FMSHFLIHQF PQIPISALKA IDHSLGQHGV LPLPKLLPKT LVHIIICFPS
101: IITFSLLGRA ATVQAVSDGY HGINLDRRRL LMRSGLVWVK LLHTSFWEFL IVLGLFGALV ASLATVPKIL FAFGVCSRVL GFFSVLGFAG IPFCVVFAHV
201: MIVGNLARVV SVVESECYGF DSIVKAKRLM EGRRHTALVM ALLSNVGFRL VECLFEFRMC TGMSLWEGPL LVSMYSLVLV LDTVMNAVFY YACKPPDFSV
301: F
101: IITFSLLGRA ATVQAVSDGY HGINLDRRRL LMRSGLVWVK LLHTSFWEFL IVLGLFGALV ASLATVPKIL FAFGVCSRVL GFFSVLGFAG IPFCVVFAHV
201: MIVGNLARVV SVVESECYGF DSIVKAKRLM EGRRHTALVM ALLSNVGFRL VECLFEFRMC TGMSLWEGPL LVSMYSLVLV LDTVMNAVFY YACKPPDFSV
301: F
001: METETNQVLR KPELKSYSHK QFHSSNALEI LRETVRILRY NLGALMLTTA VLICPVSALL LPNFLVDQSL VNKLTVKLLL VAKSSGLPLQ PFVKHSCQKF
101: AETAVSSAMC FPVFITVSLL SKAAVVYSVD CSYSREVVDI SKFLVILQKI WRRVVFTYVW ICILIVGCFT FFCVLLVAIC SSFSVLGFSP DFNVYGAMLV
201: GLAFSVVFAN AIIICNTAIV ISVLEDVSGL GALMRASDLI KGQIQVGLLM FLGSTLGLAF VEGLFDHRVK KVSYGDGSSR LWEGPLLVLM YSFVTLIDSM
301: MSAVFYFSCR VYYSMEASRG ETQPIMETVT VVDAE
101: AETAVSSAMC FPVFITVSLL SKAAVVYSVD CSYSREVVDI SKFLVILQKI WRRVVFTYVW ICILIVGCFT FFCVLLVAIC SSFSVLGFSP DFNVYGAMLV
201: GLAFSVVFAN AIIICNTAIV ISVLEDVSGL GALMRASDLI KGQIQVGLLM FLGSTLGLAF VEGLFDHRVK KVSYGDGSSR LWEGPLLVLM YSFVTLIDSM
301: MSAVFYFSCR VYYSMEASRG ETQPIMETVT VVDAE
Arabidopsis Description
Son of sevenless protein [Source:UniProtKB/TrEMBL;Acc:Q9LQY7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.