Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g09340.t01 | Wine grape | endoplasmic reticulum, vacuole | 41.61 | 18.21 |
| VIT_07s0129g00430.t01 | Wine grape | endoplasmic reticulum, vacuole | 19.71 | 6.0 |
| VIT_16s0098g01570.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 9.49 | 3.7 |
Protein Annotations
| ArrayExpress:VIT_14s0006g03110 | EMBL:FN596245 | EnsemblPlants:VIT_14s0006g03110.t01 | EnsemblPlantsGene:VIT_14s0006g03110 | EntrezGene:100854815 | EntrezGene:LOC100854815 |
| ProteinID:CBI33666 | ProteinID:CBI33666.3 | RefSeq:XP_003633715 | RefSeq:XP_003633715.1 | SEG:seg | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI0001BE3C3C | UniProt:D7TT44 | wikigene:100854815 | wikigene:LOC100854815 | MapMan:35.2 |
Description
No Description!
Coordinates
chr14:+:21611704..21612117
Molecular Weight (calculated)
15257.3 Da
IEP (calculated)
4.195
GRAVY (calculated)
0.142
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MELAQELLFT VSLALLFSFL VAKLVSLAMA ADLKSAQNVD DHIVANEVRF VETETRVESV DGGSGLVEET CEITRGGEVP VLPSEEEVSE IVELPENSPR
101: ERSGHEIMGF FLYLYLGKYF PSNRHLMTKF ELLSSIC
101: ERSGHEIMGF FLYLYLGKYF PSNRHLMTKF ELLSSIC
001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNG IP
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNG IP
Arabidopsis Description
ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.