Factsheet for VIT_07s0129g00430.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
peroxisome 1
mitochondrion 1
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, mitochondrion, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77091	Soybean	endoplasmic reticulum, vacuole	20.0	30.61
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	20.89	30.03
KRH28391	Soybean	endoplasmic reticulum	18.89	28.81
CDY03471	Canola	vacuole	22.0	26.68
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	22.0	26.33
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	21.11	26.24
CDY10995	Canola	endoplasmic reticulum, golgi	21.11	26.24
AT4G24230.6	Thale cress	endoplasmic reticulum	21.33	26.23
CDY34268	Canola	endoplasmic reticulum, vacuole	22.0	25.98
CDX92624	Canola	endoplasmic reticulum, vacuole	20.67	25.76
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	20.67	22.57
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	20.22	22.41
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	20.22	20.4
PGSC0003DMT400055408	Potato	vacuole	20.0	20.32
VIT_14s0006g03110.t01	Wine grape	endoplasmic reticulum, extracellular	6.0	19.71
Os03t0243600-01	Rice	endoplasmic reticulum	24.67	19.51
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	22.89	19.36
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	22.67	19.25
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	23.11	19.12
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	22.22	18.9
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	21.78	18.39
VIT_16s0098g01570.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	13.78	17.66
Zm00001d015957_P001	Maize	plastid	11.11	16.29
EER95185	Sorghum	endoplasmic reticulum	19.78	16.01

Protein Annotations

Gene3D:1.20.80.10	EntrezGene:100268114	wikigene:100268114	MapMan:35.1	EMBL:AM452978	InterPro:Acyl-CoA-binding_protein
InterPro:Acyl-CoA-binding_sf	ProteinID:CAN72170	ProteinID:CAN72170.1	ProteinID:CCB57759	ProteinID:CCB57759.1	UniProt:F6HSU9
InterPro:FERM/acyl-CoA-bd_prot_sf	EMBL:FN596246	GO:GO:0000062	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015098	GO:GO:0015689	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000582	InterPro:IPR014352	EntrezGene:LOC100268114	wikigene:LOC100268114	PFAM:PF00887
PFscan:PS51228	PANTHER:PTHR23310	PANTHER:PTHR23310:SF96	SUPFAM:SSF47027	TIGR:TC70178	TMHMM:TMhelix
UniParc:UPI0002108E86	ArrayExpress:VIT_07s0129g00430	EnsemblPlantsGene:VIT_07s0129g00430	EnsemblPlants:VIT_07s0129g00430.t01	unigene:Vvi.12248	RefSeq:XP_002279459
RefSeq:XP_002279459.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:15678055..15682337

Molecular Weight (calculated)

48455.1 Da

IEP (calculated)

3.861

GRAVY (calculated)

-0.335

Length

450 amino acids

Sequence
(BLAST)

001: MELFHELFLT VAISVIFSFV LSKILSSAAG GGVQDDALLG SCKDGESERG GRFVGVGSGL EICEGESVLA KLEVQEVLND VDVDVGLEER LMEGGSGEKT
101: VEVGGIVADL VEECAEDGGL EKREAVEDDA AVGLEKRLME GGYGEKTVEV GEIAADLVEE CVEDEVRSEK REAVEDDVAI GLEKRLMKEG CGEKTVEACD
201: GVGGFEADLV EEFAEDEWNS EKREAVEEDA VVGLEEKLMK GDCGEETVEV SDGVSGVEAD LVDDEGCSEK IEAVVGLEET LTKGDCGEET VEVCDRVNEV
301: EAKLVDECVD DEGNSEKSEA VGLDCEGQNE VGDERGEFFD DDWEGIQRSE LDRAFGAAAA FVGSEKNANH ILNLNSDVKM HLYGLHKVAI EGPCREPPPM
401: ALKISARAKW NAWQRLGNMS PEAAMEQYVA LLSRDIPGWS VDDPLEHRGS

Best Arabidopsis Sequence Match ( AT4G24230.6 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.