Factsheet for HORVU4Hr1G063810.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	86.87	87.03
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	82.55	83.02
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	63.79	64.27
Os03t0243600-01	Rice	endoplasmic reticulum	48.97	45.87
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	38.46	37.68
EER95185	Sorghum	endoplasmic reticulum	31.71	30.4
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	14.07	23.96
KRH77091	Soybean	endoplasmic reticulum, vacuole	12.95	23.47
CDX92624	Canola	endoplasmic reticulum, vacuole	15.57	22.99
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	15.57	22.93
CDY10995	Canola	endoplasmic reticulum, golgi	15.57	22.93
KRH28391	Soybean	endoplasmic reticulum	12.38	22.37
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	16.7	21.92
AT4G24230.6	Thale cress	endoplasmic reticulum	15.01	21.86
CDY03471	Canola	vacuole	15.2	21.83
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	15.38	21.81
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	18.39	21.78
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	16.7	21.6
CDY34268	Canola	endoplasmic reticulum, vacuole	15.38	21.52
Zm00001d015957_P001	Maize	plastid	12.38	21.5
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	15.57	18.61
PGSC0003DMT400055408	Potato	vacuole	13.7	16.48
HORVU0Hr1G005790.3	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	5.25	11.86

Protein Annotations

EnsemblPlants:HORVU4Hr1G063810.1	EnsemblPlantsGene:HORVU4Hr1G063810	Gene3D:1.20.80.10	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488
InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	InterPro:FERM/acyl-CoA-bd_prot_sf	InterPro:IPR000582	InterPro:IPR014352	ncoils:Coil
PANTHER:PTHR23310	PANTHER:PTHR23310:SF77	PFAM:PF00887	PFscan:PS51228	SEG:seg	SUPFAM:SSF47027
UniParc:UPI000296B3CA	UniProt:M0XTD9	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:534320796..534327020

Molecular Weight (calculated)

56993.0 Da

IEP (calculated)

3.935

GRAVY (calculated)

-0.417

Length

533 amino acids

Sequence
(BLAST)

001: MELLFELLLT AAATLLVAVL LAKLFSGNND PPRRDRAAGP ADVIAEEKAE EERVIEVDEV EAEAAWADVA APSLAEGWVE VEKAPATVAE GRTEWVAAEE
101: GVPATLLAPE LFLGAVSQEQ KEEGEVGKKQ PDLTAATEAA VEAKPRDSGA ESSHGEVLCV ELEEETGHQH DLGAEVAPSE VPVAGLQKQE VQATEAVGVK
201: QLHLDVGAAA AEVTDAGLEE EEEGAQAAEV IPRELASDTL PADVLDAVPG KQEEQVIEAN QHESAPVAAP RVIPDAAAKD EEMKQESVEE VVVPHEEVQN
301: KEEAQCEAGT VDQQEKLVSK EELALKKSDD LNVSQEVVPN DKVVVQLPEE ETTLLGMPED EARASMEFEE WEGIERSEVE KRFGAAAAFA ASDTGTAALS
401: KLNSDVQLQL QGLLKVAVDG PCYDAAQPLT LRPSSRAKWV SWQKLGNMHP EIAMEKYMNL LSEFVPGWMG DKTSSTEKRE VDVDSEGALL TMTAHTSDPQ
501: INQGNEGSTS IDEGPLTNPP NPEKGQSSDI PAE

Best Arabidopsis Sequence Match ( AT4G27780.2 )
(BLAST)

001: MGDWAQLAQS VILGLIFSYL LAKLISIVVT FKEDNLSLTR HPEESQLEIK PEGVDSRRLD SSCGGFGGEA DSLVAEQGSS RSDSVAGDDS EEDDDWEGVE
101: STELDEAFSA ATLFVTTAAA DRLSQKVPSD VQQQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIEIVTQLYP TWLDGGVKAG
201: SRGGDDAASN SRGTMGPVFS SLVYDEESEN ELKIDAIHGF AREGEVENLL KSIESGIPVN ARG

Arabidopsis Description

ACBP2AtACBP2 [Source:UniProtKB/TrEMBL;Acc:A0A178V3N7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.