Factsheet for Zm00001d015957_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77091	Soybean	endoplasmic reticulum, vacuole	16.94	17.69
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	17.92	17.57
KRH28391	Soybean	endoplasmic reticulum	15.96	16.61
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	22.8	12.87
Os03t0243600-01	Rice	endoplasmic reticulum	23.45	12.65
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	21.5	12.48
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	21.5	12.41
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	21.5	12.38
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	21.17	12.26
Zm00001d001798_P002	Maize	plastid	13.03	12.2
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	15.96	12.07
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	15.96	11.89
EER95185	Sorghum	endoplasmic reticulum	21.5	11.87
AT4G24230.6	Thale cress	endoplasmic reticulum	14.01	11.75
Zm00001d026639_P002	Maize	plasma membrane	12.38	11.59
CDX92624	Canola	endoplasmic reticulum, vacuole	13.36	11.36
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	16.29	11.11
PGSC0003DMT400055408	Potato	vacuole	15.64	10.84
CDY03471	Canola	vacuole	13.03	10.78
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	12.7	10.77
CDY10995	Canola	endoplasmic reticulum, golgi	12.7	10.77
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	14.66	10.09
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	11.73	9.57
CDY34268	Canola	endoplasmic reticulum, vacuole	11.73	9.45

Protein Annotations

EnsemblPlants:Zm00001d015957_P001	EnsemblPlants:Zm00001d015957_T001	EnsemblPlantsGene:Zm00001d015957	Gene3D:1.20.80.10	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	InterPro:FERM/acyl-CoA-bd_prot_sf	InterPro:IPR000582	InterPro:IPR014352
ncoils:Coil	PANTHER:PTHR23310	PANTHER:PTHR23310:SF77	PFAM:PF00887	ProteinID:AQK69810.1	SUPFAM:SSF47027
UniParc:UPI0002215592	UniProt:A0A1D6H4R1	MapMan:35.1	:	:	:

Description

Acyl-CoA-binding domain-containing protein 3

Coordinates

chr5:+:134188430..134189353

Molecular Weight (calculated)

35231.3 Da

IEP (calculated)

4.305

GRAVY (calculated)

-0.468

Length

307 amino acids

Sequence
(BLAST)

001: MAEWRNESEV RWNKVMNQFD LFVSDLVAAQ FLGRATTSAY GEASYDRNTY CFNEEPVFDK GPIFYEEPVI DLELSSFNNV APFNCSTYCL SQVIDVMTSK
101: IASFDEGPLF DRYVIDEWPM LDGELDCSTE PDEDRIPLKA ARAMHPGAGL EENVQGLEVR LDELTALSQL NSDEHVQLQG LLKVAIDDPC YDSTQPLTLR
201: LSSHAKWSAW QKLGSMHPEI ALEKYINLLS QVIPRWLRSE IMDTKKYETK CYSVGFISRA ATSDQQNYWE SEDINSKRKD GRNMLLFWST ENVDRALEPY
301: LMSNHNP

Best Arabidopsis Sequence Match ( AT4G27780.2 )
(BLAST)

001: MGDWAQLAQS VILGLIFSYL LAKLISIVVT FKEDNLSLTR HPEESQLEIK PEGVDSRRLD SSCGGFGGEA DSLVAEQGSS RSDSVAGDDS EEDDDWEGVE
101: STELDEAFSA ATLFVTTAAA DRLSQKVPSD VQQQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIEIVTQLYP TWLDGGVKAG
201: SRGGDDAASN SRGTMGPVFS SLVYDEESEN ELKIDAIHGF AREGEVENLL KSIESGIPVN ARG

Arabidopsis Description

ACBP2AtACBP2 [Source:UniProtKB/TrEMBL;Acc:A0A178V3N7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.