CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
peroxisome 1
mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	mitochondrion, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28391	Soybean	endoplasmic reticulum	85.71	85.42
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	28.23	20.44
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	30.61	20.0
KRH15433	Soybean	endoplasmic reticulum, vacuole	26.53	19.65
KRH05608	Soybean	endoplasmic reticulum, vacuole	27.21	19.61
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	26.87	19.17
Zm00001d015957_P001	Maize	plastid	17.69	16.94
KRH64393	Soybean	endoplasmic reticulum	18.71	15.9
KRH53542	Soybean	endoplasmic reticulum	19.05	15.82
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	25.17	13.6
Os03t0243600-01	Rice	endoplasmic reticulum	25.51	13.18
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	23.47	13.02
EER95185	Sorghum	endoplasmic reticulum	24.49	12.95
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	23.47	12.95
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	23.13	12.78
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	22.79	12.67

Protein Annotations

Gene3D:1.20.80.10	EntrezGene:100812452	MapMan:35.1	EMBL:ACUP02000657	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf
InterPro:FERM/acyl-CoA-bd_prot_sf	EnsemblPlantsGene:GLYMA_01G191900	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	UniProt:I1J9C7
InterPro:IPR000582	InterPro:IPR014352	ProteinID:KRH77088.1	ProteinID:KRH77089.1	ProteinID:KRH77090.1	EnsemblPlants:KRH77091
ProteinID:KRH77091	ProteinID:KRH77091.1	PFAM:PF00887	PFscan:PS51228	PANTHER:PTHR23310	PANTHER:PTHR23310:SF96
SUPFAM:SSF47027	UniParc:UPI00023370DA	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:52637747..52641610

Molecular Weight (calculated)

33334.3 Da

IEP (calculated)

4.300

GRAVY (calculated)

-0.449

Length

294 amino acids

Sequence
(BLAST)

001: MELLWELAFT IALSLLLPLV FLKLLSVTPN FEANEKVAVI RRDHDHRVES DSNSWETDKV VQIGGKIDEF RDKPIVGKLV VPEIVDVSCG SPKIHNSEKI
101: DGDRLHNEIE LEDLAEDPVV DEGNEGVVNI NKVEVELMEC DSRENKVEEV EISQCERYYN EIEESSMNEE MGENKGSVVD EDDWEGIERT ELERRFGAAV
201: VFVGSKSNAN LSNDVKMKLH GYHRIATQGP CHEPQPMALK FSARAKWIAW RQLGIMSPEE AMEQYISLLS ENIPDWIVEN PYDNAKPASA KLTL

Best Arabidopsis Sequence Match ( AT4G24230.6 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.