CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
peroxisome 1
mitochondrion 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15433	Soybean	endoplasmic reticulum, vacuole	48.53	49.87
KRH28391	Soybean	endoplasmic reticulum	19.85	27.46
KRH77091	Soybean	endoplasmic reticulum, vacuole	19.61	27.21
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	22.79	25.69
CDY10995	Canola	endoplasmic reticulum, golgi	22.79	25.69
AT4G24230.6	Thale cress	endoplasmic reticulum	22.79	25.41
CDX92624	Canola	endoplasmic reticulum, vacuole	22.3	25.21
CDY03471	Canola	vacuole	22.79	25.07
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	22.06	23.94
CDY34268	Canola	endoplasmic reticulum, vacuole	22.06	23.62
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	25.49	23.32
PGSC0003DMT400055408	Potato	vacuole	25.0	23.02
KRH53542	Soybean	endoplasmic reticulum	17.4	20.06
KRH64393	Soybean	endoplasmic reticulum	16.42	19.36

Protein Annotations

Gene3D:1.20.80.10	EntrezGene:100527318	MapMan:35.1	EMBL:ACUP02010763	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf
InterPro:FERM/acyl-CoA-bd_prot_sf	EnsemblPlantsGene:GLYMA_17G236700	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	UniProt:I1MXJ0
InterPro:IPR000582	InterPro:IPR014352	EnsemblPlants:KRH05608	ProteinID:KRH05608	ProteinID:KRH05608.1	PFAM:PF00887
PRINTS:PR00689	PFscan:PS51228	PANTHER:PTHR23310	PANTHER:PTHR23310:SF96	SUPFAM:SSF47027	UniParc:UPI000233E51A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:39189302..39193280

Molecular Weight (calculated)

44974.8 Da

IEP (calculated)

4.279

GRAVY (calculated)

-0.435

Length

408 amino acids

Sequence
(BLAST)

001: MELLMVVDDF FVTASLALLL TFIVLKLVEA MNDTHAAPKR HVVHLEPDHP VSRAKTKVGL ISPVQEEIAT CAVGAKHGIE KKAAVKSVRP RGKRFTVNPA
101: QSKVKVEPVP PAQSESTIGF VSPVQSAMCV ETERKVEEAM VEPELVQLVK TEGTVGFISP IQADTCVGTE DKKEEATVEF DSHVVVESPV KSDTDIVVTE
201: EIAEGNEGTQ ELDDSAEKRI VESVEEINVE PSVVDSDGKE NEDDYDDDWE GIERSELEKE FMAATEFVSG EENRLGGVGS NLRMELYGLY KVATEGLCRE
301: PQPMALKLAA RAKWNAWQKL GNMNPEVAME QYISLLSDKF PGWIKDTSAG MSEHETTRPE VSGSDASDLS TTLSHQQMII TERELEQESD SKDRSPLTET
401: DLENNVNK

Best Arabidopsis Sequence Match ( AT4G24230.1 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNV SGER

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.