CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
peroxisome 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05608	Soybean	endoplasmic reticulum, vacuole	49.87	48.53
AT4G24230.6	Thale cress	endoplasmic reticulum	24.94	27.05
CDX92624	Canola	endoplasmic reticulum, vacuole	24.43	26.87
CDY03471	Canola	vacuole	24.94	26.68
KRH77091	Soybean	endoplasmic reticulum, vacuole	19.65	26.53
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	24.69	26.06
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	23.68	25.97
CDY10995	Canola	endoplasmic reticulum, golgi	23.68	25.97
CDY34268	Canola	endoplasmic reticulum, vacuole	24.43	25.46
KRH28391	Soybean	endoplasmic reticulum	18.39	24.75
PGSC0003DMT400055408	Potato	vacuole	25.19	22.57
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	24.94	22.2
KRH64393	Soybean	endoplasmic reticulum	18.39	21.1
KRH53542	Soybean	endoplasmic reticulum	17.38	19.49

Protein Annotations

Gene3D:1.20.80.10	MapMan:35.1	EMBL:ACUP02008593	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	InterPro:FERM/acyl-CoA-bd_prot_sf
EnsemblPlantsGene:GLYMA_14G087600	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	UniProt:I1M8S4	InterPro:IPR000582	InterPro:IPR014352	EnsemblPlants:KRH15433	ProteinID:KRH15433
ProteinID:KRH15433.1	PFAM:PF00887	PFscan:PS51228	PANTHER:PTHR23310	PANTHER:PTHR23310:SF96	SUPFAM:SSF47027
TMHMM:TMhelix	UniParc:UPI000233B83C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:7850409..7854715

Molecular Weight (calculated)

43886.2 Da

IEP (calculated)

4.350

GRAVY (calculated)

-0.575

Length

397 amino acids

Sequence
(BLAST)

001: MELLTVVDDF FVTASLALLL TFIVLKLVEV INDTHAIPKR HVVHREPDRP VSHAEQRFTV QPAPAKTKVG FVSPVQEEFA TCAVGTEHKI EKKAAVKPVR
101: PRGKRFTVHP AQSKSGVETE CNREEIAVEP ERKIEEAVVE PVPVQTEVTV GLISPVQDDT CVGTAEKIEE ATTVESDKNV EEEIAEGNEG TQELDDSAEK
201: RNVKSVEEIS VEPSTEIEAS VTDSGVKENF DDDDDDWEGI ERSELEKEFM AATKFVSGEE NRLGGAGSNL RMELYGLHKV ATEGPCREPQ PMALKLAARA
301: KWNAWQKLGN MNPEVAMEQY VSLLSDKFPG WMKDTSAGIG EHETTRPEVS ESAASDLSTT LSNQQQMITT ERELEQESDS KDRSPLTVSD LENSVNK

Best Arabidopsis Sequence Match ( AT4G24230.6 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.