CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	99.72	99.72
CDX92624	Canola	endoplasmic reticulum, vacuole	79.56	79.78
CDY03471	Canola	vacuole	51.93	50.67
CDY34268	Canola	endoplasmic reticulum, vacuole	51.1	48.56
AT4G24230.6	Thale cress	endoplasmic reticulum	45.58	45.08
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	24.86	28.75
CDX92839	Canola	endoplasmic reticulum	12.15	26.35
KRH15433	Soybean	endoplasmic reticulum, vacuole	25.97	23.68
KRH05608	Soybean	endoplasmic reticulum, vacuole	25.69	22.79
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	26.24	21.11
CDY29860	Canola	endoplasmic reticulum	14.36	20.63
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	25.14	20.4
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	22.1	19.7
PGSC0003DMT400055408	Potato	vacuole	24.03	19.64
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	22.1	19.42
CDY19024	Canola	endoplasmic reticulum	17.13	18.29
CDY62840	Canola	endoplasmic reticulum	16.3	17.4
CDX89227	Canola	endoplasmic reticulum	16.57	17.05
CDY49168	Canola	endoplasmic reticulum	16.02	16.96
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	22.93	15.69
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	23.48	15.62
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	22.93	15.57
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	22.65	15.41
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	22.38	15.28
Os03t0243600-01	Rice	endoplasmic reticulum	22.1	14.06
EER95185	Sorghum	endoplasmic reticulum	20.17	13.13
Zm00001d015957_P001	Maize	plastid	10.77	12.7

Protein Annotations

Gene3D:1.20.80.10	MapMan:35.1	GO:A0A078F929	UniProt:A0A078F929	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf
EnsemblPlants:CDY10995	ProteinID:CDY10995	ProteinID:CDY10995.1	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	EnsemblPlantsGene:GSBRNA2T00048940001	InterPro:IPR000582	InterPro:IPR014352	PFAM:PF00887	PRINTS:PR00689
PFscan:PS51228	PANTHER:PTHR23310	PANTHER:PTHR23310:SF96	SUPFAM:SSF47027	UniParc:UPI0004EE5F29	SEG:seg

Description

BnaA03g46540DBnaA03g46540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F929]

Coordinates

chrLK032008:-:555753..557519

Molecular Weight (calculated)

39438.0 Da

IEP (calculated)

3.888

GRAVY (calculated)

-0.332

Length

362 amino acids

Sequence
(BLAST)

001: MEFFLEMLLT AVVAVLFSFL VAKLVSVSMV GNSGGVVNDQ AEETEIGVVA VEEELCSGLK VDAPVVQSER RLGAVVVDEN VERVDRFGSE ADRVVDEVKE
101: GTKGEDWVVT SDESSAAGSP ENVLAEEMMV CGEDKQRDAA EEFNVRTVGA ESTASVSLEN VRAEEIMIDG EEVRSEEDVI SGELVVAESE DVRVEESNTV
201: EESENKMEFN TKEGDKEEKK ELSIEEEEDD DWEGIERSEL EKAFAATSSL LEVSGKAEEV GDEVKMELYG LYMIATEGSC RETQPMAIMV SARAKWNAWQ
301: KLGNMSQEEA MEKYLALVSK EIPGLMNTVG KIPVLPPNSG SLEDPTTLGT TGVAFSKNGK TN

Best Arabidopsis Sequence Match ( AT4G24230.4 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNG IP

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.