Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G227100.1 | Wheat | endoplasmic reticulum, plasma membrane | 68.24 | 67.86 |
| TraesCS4D01G227800.1 | Wheat | endoplasmic reticulum | 65.97 | 65.85 |
| HORVU4Hr1G063810.1 | Barley | endoplasmic reticulum | 64.27 | 63.79 |
| Os03t0243600-01 | Rice | endoplasmic reticulum | 44.99 | 41.83 |
| Zm00001d028397_P001 | Maize | endoplasmic reticulum, plasma membrane | 38.0 | 36.95 |
| EER95185 | Sorghum | endoplasmic reticulum | 33.08 | 31.47 |
| AT4G24230.6 | Thale cress | endoplasmic reticulum | 16.07 | 23.22 |
| Bra019240.1-P | Field mustard | endoplasmic reticulum, golgi | 15.69 | 22.93 |
| CDY10995 | Canola | endoplasmic reticulum, golgi | 15.69 | 22.93 |
| KRH77091 | Soybean | endoplasmic reticulum, vacuole | 12.67 | 22.79 |
| KRH28391 | Soybean | endoplasmic reticulum | 12.67 | 22.71 |
| VIT_18s0001g09340.t01 | Wine grape | endoplasmic reticulum, vacuole | 13.23 | 22.36 |
| VIT_07s0129g00430.t01 | Wine grape | endoplasmic reticulum, vacuole | 18.9 | 22.22 |
| CDX92624 | Canola | endoplasmic reticulum, vacuole | 15.12 | 22.16 |
| GSMUA_AchrUn_... | Banana | golgi, nucleus, peroxisome | 16.64 | 21.67 |
| GSMUA_Achr4P19960_001 | Banana | endoplasmic reticulum | 16.82 | 21.6 |
| CDY03471 | Canola | vacuole | 15.12 | 21.56 |
| Zm00001d015957_P001 | Maize | plastid | 12.48 | 21.5 |
| Bra013778.1-P | Field mustard | endoplasmic reticulum, vacuole | 15.12 | 21.28 |
| CDY34268 | Canola | endoplasmic reticulum, vacuole | 15.12 | 21.0 |
| Solyc04g078090.2.1 | Tomato | endoplasmic reticulum, golgi | 14.18 | 16.82 |
| TraesCS2A01G586100.1 | Wheat | endoplasmic reticulum | 9.64 | 15.84 |
| PGSC0003DMT400055408 | Potato | vacuole | 13.04 | 15.58 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G071200.1 | EnsemblPlantsGene:TraesCS4A01G071200 | Gene3D:1.20.80.10 | GO:GO:0000062 | GO:GO:0003674 | GO:GO:0005488 |
| InterPro:Acyl-CoA-binding_protein | InterPro:Acyl-CoA-binding_sf | InterPro:FERM/acyl-CoA-bd_prot_sf | InterPro:IPR000582 | InterPro:IPR014352 | PANTHER:PTHR23310 |
| PANTHER:PTHR23310:SF77 | PFAM:PF00887 | PFscan:PS51228 | SEG:seg | SUPFAM:SSF47027 | MapMan:35.1 |
Description
No Description!
Coordinates
chr4A:-:68560993..68566420
Molecular Weight (calculated)
56895.0 Da
IEP (calculated)
3.959
GRAVY (calculated)
-0.434
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLFELLLT AAATLLVAVL LAKLFSGAND PPRRDRADVI AEEKAEEERT VEANEVGAWA DVAAAPALAE GWVEVEKAPA AVAEGMTEWV AAEEEGVPAT
101: LLAPELFLGT VSREQKEEGE VGKKHCDLTA AAEAAVEVKP RDSGDEAAPR EVLGVELEEE TTQQRNDLGA EVAPSEVPDA GLQKQEVHAM EAVEVKQLHL
201: DVGAAPAEVI DAGPEEREEG VQAAEVIPRE LAPETLPSDV LDVIPGKQEE QVIEASQHEL PLVVAPRVIP DAAAKDEEMK EQSVEEVVVP QEEVHSKEEA
301: QCEAGRDDQH EELVPKDEPA LKKSDDLSVS QEDSPNDKVD VQLPEKDTTL LGMPEDEARA SMEFEEWEGI ERSEVEKRFG AAAAFAASDT GAAALSKLNT
401: DVQLQLQGLL KVAVDGPCYD AAQPLTLRPS SRAKWVSWQK LGNMHPEIAM EKYMNLLSEF IPGWMGDATS STEKHKVDVD SEGALLTMTT HTSDPQINQG
501: NEGSASIDEG PLTSPPNPEI GQSSDVPAE
101: LLAPELFLGT VSREQKEEGE VGKKHCDLTA AAEAAVEVKP RDSGDEAAPR EVLGVELEEE TTQQRNDLGA EVAPSEVPDA GLQKQEVHAM EAVEVKQLHL
201: DVGAAPAEVI DAGPEEREEG VQAAEVIPRE LAPETLPSDV LDVIPGKQEE QVIEASQHEL PLVVAPRVIP DAAAKDEEMK EQSVEEVVVP QEEVHSKEEA
301: QCEAGRDDQH EELVPKDEPA LKKSDDLSVS QEDSPNDKVD VQLPEKDTTL LGMPEDEARA SMEFEEWEGI ERSEVEKRFG AAAAFAASDT GAAALSKLNT
401: DVQLQLQGLL KVAVDGPCYD AAQPLTLRPS SRAKWVSWQK LGNMHPEIAM EKYMNLLSEF IPGWMGDATS STEKHKVDVD SEGALLTMTT HTSDPQINQG
501: NEGSASIDEG PLTSPPNPEI GQSSDVPAE
001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER
Arabidopsis Description
ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.