Factsheet for Zm00001d028397_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	38.97	39.85
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	38.24	39.25
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	37.68	38.46
EER95185	Sorghum	endoplasmic reticulum	39.15	38.31
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	36.95	38.0
Os03t0243600-01	Rice	endoplasmic reticulum	38.05	36.38
KRH77091	Soybean	endoplasmic reticulum, vacuole	13.6	25.17
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	13.97	24.28
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	18.38	24.27
KRH28391	Soybean	endoplasmic reticulum	12.87	23.73
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	15.62	23.48
CDY10995	Canola	endoplasmic reticulum, golgi	15.62	23.48
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	15.99	23.14
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	19.12	23.11
CDX92624	Canola	endoplasmic reticulum, vacuole	15.26	22.99
CDY34268	Canola	endoplasmic reticulum, vacuole	15.99	22.83
Zm00001d015957_P001	Maize	plastid	12.87	22.8
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	16.54	22.17
AT4G24230.6	Thale cress	endoplasmic reticulum	14.71	21.86
CDY03471	Canola	vacuole	14.89	21.83
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	15.81	19.28
PGSC0003DMT400055408	Potato	vacuole	15.07	18.51
Zm00001d001798_P002	Maize	plastid	9.93	16.46
Zm00001d026639_P002	Maize	plasma membrane	9.93	16.46

Protein Annotations

Gene3D:1.20.80.10	EntrezGene:100274428	MapMan:35.1	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	UniProt:B4G0Y2
EMBL:BT043020	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	InterPro:IPR000582
InterPro:IPR014352	ProteinID:ONL95887.1	PFAM:PF00887	PFscan:PS51228	PANTHER:PTHR23310	PANTHER:PTHR23310:SF77
SUPFAM:SSF47027	TMHMM:TMhelix	UniParc:UPI00017B796B	EnsemblPlantsGene:Zm00001d028397	EnsemblPlants:Zm00001d028397_P001	EnsemblPlants:Zm00001d028397_T001
SEG:seg	:	:	:	:	:

Description

Acyl-CoA-binding domain-containing protein 3

Coordinates

chr1:+:33440965..33448136

Molecular Weight (calculated)

57934.3 Da

IEP (calculated)

3.864

GRAVY (calculated)

-0.272

Length

544 amino acids

Sequence
(BLAST)

001: MELFYELLLT AAVTLLAALL LATLFAANDS HRRTDRAAAA IAEEVAEEER IIEVDEVMRS EGMAAVAPSE ADGWVEAEKA PAVVVAEVKE PESLPEEEGV
101: PVKAVREVRL AAEVEEGEDG GGGVKRPDLT SATVVAAVGA EASQLVSGAE VVPKEVSGAA GLEERTVQDV VVNQYDLGAE VALVPVEVLE AGPDKQGVEV
201: VGVAQVPPLE TEAAEVKQHH LVAEAAPAED VLDVGLVDKS VRAIEVRPNE LDSETVLEEI LDAVLEEEEQ VEHELPAGAA PQPVLDVPLA GKGELKHHQP
301: VEEAAEVHED VQCKQEAECE AQTVDQQQEL VPEEESVAGK NDDVNVIHEC SFSDEVVTEL PVGEVTSQGL PKDDPEADME FEEWEGIERS EVEKRFGAAA
401: AFAASGAGAA ALSKLDSDVQ LQLQGLLKVA IDGPCYDSAQ PLTLRPSSRA KWSAWQKLGN MNPEIAMEKY MNLLSETIPG WMMNETLDTE NTGSLPAETI
501: LTTMASTSDQ RSNQGNEDNS SIGEGHPITS PNPEKGQSSD IPTE

Best Arabidopsis Sequence Match ( AT4G24230.6 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.