CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77091	Soybean	endoplasmic reticulum, vacuole	85.42	85.71
KRH05608	Soybean	endoplasmic reticulum, vacuole	27.46	19.85
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	27.12	19.7
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	28.81	18.89
KRH15433	Soybean	endoplasmic reticulum, vacuole	24.75	18.39
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	24.75	17.72
Zm00001d015957_P001	Maize	plastid	16.61	15.96
KRH64393	Soybean	endoplasmic reticulum	18.64	15.9
KRH53542	Soybean	endoplasmic reticulum	17.97	14.97
Os03t0243600-01	Rice	endoplasmic reticulum	25.08	13.01
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	23.73	12.87
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	22.71	12.67
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	22.71	12.64
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	22.37	12.41
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	22.37	12.38
EER95185	Sorghum	endoplasmic reticulum	22.71	12.05

Protein Annotations

Gene3D:1.20.80.10	EntrezGene:100813431	MapMan:35.1	EMBL:ACUP02006749	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf
EMBL:BT099495	UniProt:C6TP09	InterPro:FERM/acyl-CoA-bd_prot_sf	EnsemblPlantsGene:GLYMA_11G050200	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	InterPro:IPR000582	InterPro:IPR014352	EnsemblPlants:KRH28391	ProteinID:KRH28391	ProteinID:KRH28391.1
PFAM:PF00887	PFscan:PS51228	PANTHER:PTHR23310	PANTHER:PTHR23310:SF96	SUPFAM:SSF47027	UniParc:UPI0001B17181
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:3761037..3762845

Molecular Weight (calculated)

33099.0 Da

IEP (calculated)

4.164

GRAVY (calculated)

-0.363

Length

295 amino acids

Sequence
(BLAST)

001: MELLWELAFT IALSLLLPLV FLKLLSVTPN LEANEKVALL GRDHDHGIKS DSKSWETDKV VRIGGKIDEF RDKPIVGKLI VPEIVDVSCG SPKIHNSEKI
101: DEYSVYDEIE LVDLAEDPVV DEGNDGVVNI DEVEVELMEC DSRENKVEEV EISQCERNYN EIDESSMNEE IGENKGSVVD EDDWEGIEST ELERRFGAAV
201: VFVGSKSNAN LSNDVKMKLH GYHRIATQGP CHEPQPMALK FSARAKWIAR RQLGIMSPEE AMEQFISLLS ESIPDWIEEN PYDNAKPASA TNLVI

Best Arabidopsis Sequence Match ( AT4G24230.6 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.