Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G227100.1 | Wheat | endoplasmic reticulum, plasma membrane | 91.32 | 90.98 |
| HORVU4Hr1G063810.1 | Barley | endoplasmic reticulum | 83.02 | 82.55 |
| TraesCS4A01G071200.1 | Wheat | endoplasmic reticulum | 65.85 | 65.97 |
| Os03t0243600-01 | Rice | endoplasmic reticulum | 49.25 | 45.87 |
| Zm00001d028397_P001 | Maize | endoplasmic reticulum, plasma membrane | 39.25 | 38.24 |
| EER95185 | Sorghum | endoplasmic reticulum | 32.83 | 31.3 |
| VIT_18s0001g09340.t01 | Wine grape | endoplasmic reticulum, vacuole | 14.15 | 23.96 |
| KRH77091 | Soybean | endoplasmic reticulum, vacuole | 13.02 | 23.47 |
| KRH28391 | Soybean | endoplasmic reticulum | 12.64 | 22.71 |
| VIT_07s0129g00430.t01 | Wine grape | endoplasmic reticulum, vacuole | 19.25 | 22.67 |
| CDX92624 | Canola | endoplasmic reticulum, vacuole | 15.28 | 22.44 |
| CDY10995 | Canola | endoplasmic reticulum, golgi | 15.28 | 22.38 |
| Bra019240.1-P | Field mustard | endoplasmic reticulum, golgi | 15.28 | 22.38 |
| GSMUA_AchrUn_... | Banana | golgi, nucleus, peroxisome | 16.79 | 21.92 |
| CDY03471 | Canola | vacuole | 15.09 | 21.56 |
| GSMUA_Achr4P19960_001 | Banana | endoplasmic reticulum | 16.6 | 21.36 |
| Zm00001d015957_P001 | Maize | plastid | 12.26 | 21.17 |
| AT4G24230.6 | Thale cress | endoplasmic reticulum | 14.53 | 21.04 |
| Bra013778.1-P | Field mustard | endoplasmic reticulum, vacuole | 14.72 | 20.74 |
| CDY34268 | Canola | endoplasmic reticulum, vacuole | 14.72 | 20.47 |
| Solyc04g078090.2.1 | Tomato | endoplasmic reticulum, golgi | 16.23 | 19.28 |
| PGSC0003DMT400055408 | Potato | vacuole | 14.34 | 17.16 |
| TraesCS2D01G600500.1 | Wheat | endoplasmic reticulum | 9.81 | 16.15 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G227800.1 | EnsemblPlantsGene:TraesCS4D01G227800 | Gene3D:1.20.80.10 | GO:GO:0000062 | GO:GO:0003674 | GO:GO:0005488 |
| InterPro:Acyl-CoA-binding_protein | InterPro:Acyl-CoA-binding_sf | InterPro:FERM/acyl-CoA-bd_prot_sf | InterPro:IPR000582 | InterPro:IPR014352 | PANTHER:PTHR23310 |
| PANTHER:PTHR23310:SF77 | PFAM:PF00887 | PFscan:PS51228 | SEG:seg | SUPFAM:SSF47027 | MapMan:35.1 |
Description
No Description!
Coordinates
chr4D:-:387081364..387086233
Molecular Weight (calculated)
56754.7 Da
IEP (calculated)
3.950
GRAVY (calculated)
-0.451
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLFELLLT AAATLLVAFL LAKLLSGTND PPRRDRAAGP ADVIAEEKAE EAEEERAIEV DEVGAWADVA APPLAEGWVE VEKAPATVAE GMTEWVAAEE
101: EGVPATLLAP ELFLGTVSRE QKEEGEVGKK HCDLTAAAEA AVEAKPRDLG DEAAPSEVLD VELEEETAQQ HDLGAEGAPS EVPDAGVQKQ EVHAMEAVEV
201: KQLHLDVGAA PAEVIDAGPE EKAEGVQAAE VIPRELASET PPADVLDVVI GKQEEQVIEA SQHELAPVVA PRVIPDAAAK DEEMKEQSVE EVVQVHNKEE
301: ARREAGTDDQ QEKLVPKDEP ALEKSDDLNV SQEDSSNDKV DVQLPEKDTT LLGMPEDEAR ASMEFEEWEG IERSEVEKRF GAAAAFAASD AGAAALSKLN
401: SDVQLQLQGL LKVAVDGPCY DAAQPLTLRP SSRAKWVSWQ KLGNMHPEIA MEKYMNLLSE FVPGWMGDTT PSTEKHKVDV DSEGAVLTMT THTSDPQISQ
501: GNEGSTSIDE GPLTSPPNPE KGQSSDVPAE
101: EGVPATLLAP ELFLGTVSRE QKEEGEVGKK HCDLTAAAEA AVEAKPRDLG DEAAPSEVLD VELEEETAQQ HDLGAEGAPS EVPDAGVQKQ EVHAMEAVEV
201: KQLHLDVGAA PAEVIDAGPE EKAEGVQAAE VIPRELASET PPADVLDVVI GKQEEQVIEA SQHELAPVVA PRVIPDAAAK DEEMKEQSVE EVVQVHNKEE
301: ARREAGTDDQ QEKLVPKDEP ALEKSDDLNV SQEDSSNDKV DVQLPEKDTT LLGMPEDEAR ASMEFEEWEG IERSEVEKRF GAAAAFAASD AGAAALSKLN
401: SDVQLQLQGL LKVAVDGPCY DAAQPLTLRP SSRAKWVSWQ KLGNMHPEIA MEKYMNLLSE FVPGWMGDTT PSTEKHKVDV DSEGAVLTMT THTSDPQISQ
501: GNEGSTSIDE GPLTSPPNPE KGQSSDVPAE
001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER
Arabidopsis Description
ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.