Factsheet for Bra013778.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34268	Canola	endoplasmic reticulum, vacuole	98.4	97.11
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	49.2	51.1
AT4G24230.6	Thale cress	endoplasmic reticulum	42.55	43.72
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	25.53	30.67
KRH15433	Soybean	endoplasmic reticulum, vacuole	26.06	24.69
KRH05608	Soybean	endoplasmic reticulum, vacuole	23.94	22.06
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	26.33	22.0
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	22.07	20.44
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	24.2	20.4
PGSC0003DMT400055408	Potato	vacuole	23.4	19.86
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	21.01	19.17
Bra019027.1-P	Field mustard	endoplasmic reticulum	12.5	18.65
Bra022656.1-P	Field mustard	endoplasmic reticulum	15.43	17.01
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	23.14	15.99
Bra026307.1-P	Field mustard	endoplasmic reticulum	15.16	15.66
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	21.81	15.38
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	21.28	15.12
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	21.01	14.85
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	20.74	14.72
EER95185	Sorghum	endoplasmic reticulum	21.01	14.21
Os03t0243600-01	Rice	endoplasmic reticulum	19.68	13.01
Zm00001d015957_P001	Maize	plastid	9.57	11.73

Protein Annotations

EnsemblPlants:Bra013778.1	EnsemblPlants:Bra013778.1-P	EnsemblPlantsGene:Bra013778	Gene3D:1.20.80.10	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	InterPro:FERM/acyl-CoA-bd_prot_sf	InterPro:IPR000582	InterPro:IPR014352
PANTHER:PTHR23310	PANTHER:PTHR23310:SF96	PFAM:PF00887	PFscan:PS51228	PRINTS:PR00689	SEG:seg
SUPFAM:SSF47027	TMHMM:TMhelix	UniParc:UPI000254627C	UniProt:M4DBB8	MapMan:35.1	:

Description

AT4G24230 (E=1e-080) ACBP3 | ACBP3 (ACYL-COA-BINDING DOMAIN 3); acyl-CoA binding

Coordinates

chrA01:-:7722211..7723882

Molecular Weight (calculated)

40788.3 Da

IEP (calculated)

3.823

GRAVY (calculated)

-0.323

Length

376 amino acids

Sequence
(BLAST)

001: MEFLLELLLT AVVALLFSFL VAKIVSVSMA GENDGSSDQA GETEIGVGDG SATVEELCFG LKVDAPVVQS ERKLRAVVDE NVEHVDRFGS GADRVVDEVE
101: EAARDVELVV PTTEANEFLA AVSPGNVVAK EMIVRGEEET GYEREELVVS TAEAESTASI SPENVITEEI MNRGQEEGTE GRSDCVENVK REVVVTESEK
201: VRVEESNSVE KSEDKMELSI EEQVELSIEE EDLDDDWEGI ERSELEIAFA AASNLLEESG KGEDIGAEAK MELYGLHKIA TEGSCREAQP MAVMLSARAK
301: WNAWQRLGNM SQEEAMEQYL ALVSKEIPDL VNTVGKMPET ETSVDLPPNS GSLEDPTTLD TIGVATSKNG EDESSV

Best Arabidopsis Sequence Match ( AT4G24230.4 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNG IP

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.