Factsheet for TraesCS4B01G227100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	90.98	91.32
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	87.03	86.87
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	67.86	68.24
Os03t0243600-01	Rice	endoplasmic reticulum	49.62	46.4
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	39.85	38.97
EER95185	Sorghum	endoplasmic reticulum	32.89	31.47
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	13.72	23.32
KRH77091	Soybean	endoplasmic reticulum, vacuole	12.78	23.13
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	19.36	22.89
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	15.41	22.65
CDY10995	Canola	endoplasmic reticulum, golgi	15.41	22.65
CDX92624	Canola	endoplasmic reticulum, vacuole	15.23	22.44
KRH28391	Soybean	endoplasmic reticulum	12.41	22.37
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	16.92	22.17
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	17.11	22.09
Zm00001d015957_P001	Maize	plastid	12.41	21.5
AT4G24230.6	Thale cress	endoplasmic reticulum	14.47	21.04
CDY03471	Canola	vacuole	14.66	21.02
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	14.85	21.01
CDY34268	Canola	endoplasmic reticulum, vacuole	14.85	20.73
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	15.41	18.39
PGSC0003DMT400055408	Potato	vacuole	13.72	16.48
TraesCS2B01G596900.1	Wheat	endoplasmic reticulum	8.83	14.69

Protein Annotations

EnsemblPlants:TraesCS4B01G227100.1	EnsemblPlantsGene:TraesCS4B01G227100	Gene3D:1.20.80.10	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488
InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	InterPro:FERM/acyl-CoA-bd_prot_sf	InterPro:IPR000582	InterPro:IPR014352	PANTHER:PTHR23310
PANTHER:PTHR23310:SF77	PFAM:PF00887	PFscan:PS51228	SEG:seg	SUPFAM:SSF47027	MapMan:35.1

Description

No Description!

Coordinates

chr4B:-:475247395..475256621

Molecular Weight (calculated)

57219.3 Da

IEP (calculated)

3.973

GRAVY (calculated)

-0.472

Length

532 amino acids

Sequence
(BLAST)

001: MELLFELLLT AAATLLVAFL LAKLLSGNND PPRRDRAAGP ADVIAEEKAE EAEEERVIEV DEVGAWADVA APALAEGWVE VEKAPATVAE GMTEWVAAEE
101: GVPATLAPEL FLGTVSREQK EEGEVGKKQC DLTAAVEAAV EAKPRDSGAE AAPREVLDVE LEEETTQQND LGAEVAPSEV PDAGVQKQEV HAMEAVEVKQ
201: LHLDVGAAPA EVVDAGLERE EEGAQAAEVI PRELASETPP ADVLDIVPGK QQEQVIEANQ HELAHVVAPR VIPDAAAKDE EMKEPSVEEV VVPHEEVHNK
301: EEARHEAGTD DQQEKLVPKD EPALKKSDDL NVSQEDSSND KVDVQLPEKD TTLLGMPEDE ARASMEFEEW EGIERSEVEK RFGAAAAFAA SDAGAAALSK
401: LNSDVQLQLQ GLLKVAVDGP CYDAAQPLTL RPSSRAKWVS WQKLGNMHPE IAMEKYMNLL SEFLPGWMGD TTPSTEKQKV DVDSEGALLT MTTHTSDPQI
501: NQGNEGSTSI DEGPLTVPPN PEKGQSSDVP TE

Best Arabidopsis Sequence Match ( AT4G27780.2 )
(BLAST)

001: MGDWAQLAQS VILGLIFSYL LAKLISIVVT FKEDNLSLTR HPEESQLEIK PEGVDSRRLD SSCGGFGGEA DSLVAEQGSS RSDSVAGDDS EEDDDWEGVE
101: STELDEAFSA ATLFVTTAAA DRLSQKVPSD VQQQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIEIVTQLYP TWLDGGVKAG
201: SRGGDDAASN SRGTMGPVFS SLVYDEESEN ELKIDAIHGF AREGEVENLL KSIESGIPVN ARG

Arabidopsis Description

ACBP2AtACBP2 [Source:UniProtKB/TrEMBL;Acc:A0A178V3N7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.