CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34268	Canola	endoplasmic reticulum, vacuole	73.85	71.92
CDX92624	Canola	endoplasmic reticulum, vacuole	50.94	52.35
CDY10995	Canola	endoplasmic reticulum, golgi	50.67	51.93
AT4G24230.6	Thale cress	endoplasmic reticulum	42.59	43.17
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	25.88	30.67
CDX92839	Canola	endoplasmic reticulum	12.4	27.54
KRH15433	Soybean	endoplasmic reticulum, vacuole	26.68	24.94
KRH05608	Soybean	endoplasmic reticulum, vacuole	25.07	22.79
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	26.68	22.0
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	22.37	20.15
PGSC0003DMT400055408	Potato	vacuole	23.72	19.86
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	21.29	19.46
CDY29860	Canola	endoplasmic reticulum	13.21	19.44
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	22.91	19.06
CDY62840	Canola	endoplasmic reticulum	15.63	17.11
CDY49168	Canola	endoplasmic reticulum	15.36	16.67
CDY19024	Canola	endoplasmic reticulum	15.09	16.52
CDX89227	Canola	endoplasmic reticulum	15.63	16.48
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	21.83	15.2
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	21.56	15.12
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	21.56	15.09
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	21.83	14.89
EER95185	Sorghum	endoplasmic reticulum	22.1	14.75
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	21.02	14.66
Os03t0243600-01	Rice	endoplasmic reticulum	21.29	13.88
Zm00001d015957_P001	Maize	plastid	10.78	13.03

Protein Annotations

Gene3D:1.20.80.10	MapMan:35.1	GO:A0A078EQJ4	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	EnsemblPlants:CDY03471
ProteinID:CDY03471	ProteinID:CDY03471.1	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488
EnsemblPlantsGene:GSBRNA2T00116133001	InterPro:IPR000582	InterPro:IPR014352	PFAM:PF00887	PRINTS:PR00689	PFscan:PS51228
PANTHER:PTHR23310	PANTHER:PTHR23310:SF96	SUPFAM:SSF47027	TMHMM:TMhelix	UniParc:UPI0004EE740A	SEG:seg

Description

BnaC01g16110D

Coordinates

chrLK031943:+:631594..633407

Molecular Weight (calculated)

40614.2 Da

IEP (calculated)

3.855

GRAVY (calculated)

-0.332

Length

371 amino acids

Sequence
(BLAST)

001: MEFLLELLLT AVVALLFSFL VAKIVSVSMA GESDRIEKTE IGVGDGSATV EELCFGLKVD APVVQSERKL RVVVDENVDR FGNGADRVVD EVEEAARDVE
101: LVVLTTEANE FLAAVSPGNV IAKEMIVRGE DEGREETSGE VGDERQELIE STAEAESTAS VVQENMIAEE IINRGHEEEL SSAEGVSSCV ERGEVVVTES
201: EEVRVEESNS GEKSEDKMEF CIEEQVELSI EEDDDDDDDW EGIEKSELEI TFSAASNLLE QSGKGEEITA EAKMELYGLH KIATEGSCRE AQPMAIMLSA
301: RAKWNAWQRL GNMSQEEAME QYLALVSKEI PGLLNTVGKM PETETSVDLR SLEDPTTLDT IGFPTSKNGK D

Best Arabidopsis Sequence Match ( AT4G24230.4 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNG IP

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.