Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 5
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019240.1-P | Field mustard | endoplasmic reticulum, golgi | 45.08 | 45.58 |
| CDY10995 | Canola | endoplasmic reticulum, golgi | 45.08 | 45.58 |
| CDX92624 | Canola | endoplasmic reticulum, vacuole | 44.26 | 44.88 |
| CDY03471 | Canola | vacuole | 43.17 | 42.59 |
| Bra013778.1-P | Field mustard | endoplasmic reticulum, vacuole | 43.72 | 42.55 |
| CDY34268 | Canola | endoplasmic reticulum, vacuole | 43.99 | 42.26 |
| VIT_18s0001g09340.t01 | Wine grape | endoplasmic reticulum, vacuole | 24.59 | 28.75 |
| KRH15433 | Soybean | endoplasmic reticulum, vacuole | 27.05 | 24.94 |
| KRH05608 | Soybean | endoplasmic reticulum, vacuole | 25.41 | 22.79 |
| PGSC0003DMT400055408 | Potato | vacuole | 25.96 | 21.44 |
| VIT_07s0129g00430.t01 | Wine grape | endoplasmic reticulum, vacuole | 26.23 | 21.33 |
| Solyc04g078090.2.1 | Tomato | endoplasmic reticulum, golgi | 25.14 | 20.63 |
| GSMUA_AchrUn_... | Banana | golgi, nucleus, peroxisome | 22.68 | 20.44 |
| GSMUA_Achr4P19960_001 | Banana | endoplasmic reticulum | 21.86 | 19.42 |
| AT5G53470.1 | Thale cress | endoplasmic reticulum | 16.67 | 18.05 |
| AT4G27780.1 | Thale cress | endoplasmic reticulum | 17.21 | 17.8 |
| TraesCS4A01G071200.1 | Wheat | endoplasmic reticulum | 23.22 | 16.07 |
| EER95185 | Sorghum | endoplasmic reticulum | 22.95 | 15.11 |
| HORVU4Hr1G063810.1 | Barley | endoplasmic reticulum | 21.86 | 15.01 |
| Os03t0243600-01 | Rice | endoplasmic reticulum | 23.22 | 14.94 |
| Zm00001d028397_P001 | Maize | endoplasmic reticulum, plasma membrane | 21.86 | 14.71 |
| TraesCS4D01G227800.1 | Wheat | endoplasmic reticulum | 21.04 | 14.53 |
| TraesCS4B01G227100.1 | Wheat | endoplasmic reticulum, plasma membrane | 21.04 | 14.47 |
| Zm00001d015957_P001 | Maize | plastid | 11.75 | 14.01 |
Protein Annotations
| Gene3D:1.20.80.10 | MapMan:35.1 | EntrezGene:828524 | Symbol:ACBP3 | ProteinID:AEE84875.1 | ArrayExpress:AT4G24230 |
| EnsemblPlantsGene:AT4G24230 | RefSeq:AT4G24230 | TAIR:AT4G24230 | RefSeq:AT4G24230-TAIR-G | EnsemblPlants:AT4G24230.6 | TAIR:AT4G24230.6 |
| InterPro:Acyl-CoA-binding_protein | InterPro:Acyl-CoA-binding_sf | Unigene:At.71005 | UniProt:B3H4G6 | ncoils:Coil | InterPro:FERM/acyl-CoA-bd_prot_sf |
| GO:GO:0000062 | GO:GO:0001666 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0006810 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009617 | GO:GO:0009628 | GO:GO:0009646 | GO:GO:0015908 | GO:GO:0042742 | GO:GO:0050832 |
| InterPro:IPR000582 | InterPro:IPR014352 | RefSeq:NP_001119041.1 | PFAM:PF00887 | PO:PO:0000005 | PO:PO:0000293 |
| PO:PO:0005020 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009072 | PO:PO:0009073 | PO:PO:0009074 | PFscan:PS51228 | PANTHER:PTHR23310 | PANTHER:PTHR23310:SF96 |
| SUPFAM:SSF47027 | UniParc:UPI0001739441 | SEG:seg | : | : | : |
Description
ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
Coordinates
chr4:-:12566935..12568754
Molecular Weight (calculated)
39773.1 Da
IEP (calculated)
3.869
GRAVY (calculated)
-0.363
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNE IVSGER
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.