Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62840 | Canola | endoplasmic reticulum | 87.28 | 87.02 |
| Bra022656.1-P | Field mustard | endoplasmic reticulum | 86.09 | 85.34 |
| CDY49168 | Canola | endoplasmic reticulum | 84.91 | 83.92 |
| AT4G27780.1 | Thale cress | endoplasmic reticulum | 75.15 | 71.75 |
| VIT_16s0098g01570.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 64.5 | 62.11 |
| GSMUA_Achr4P05400_001 | Banana | cytosol | 50.3 | 61.59 |
| KRH64393 | Soybean | endoplasmic reticulum | 62.72 | 61.27 |
| Solyc03g082910.2.1 | Tomato | nucleus | 62.13 | 60.69 |
| PGSC0003DMT400047661 | Potato | endoplasmic reticulum | 62.43 | 60.63 |
| KRH53542 | Soybean | endoplasmic reticulum | 62.43 | 59.6 |
| GSMUA_Achr4P04370_001 | Banana | golgi, plasma membrane | 57.1 | 57.1 |
| TraesCS2D01G600500.1 | Wheat | endoplasmic reticulum | 53.55 | 56.21 |
| TraesCS2A01G586100.1 | Wheat | endoplasmic reticulum | 53.25 | 55.9 |
| Zm00001d001798_P002 | Maize | plastid | 54.14 | 55.79 |
| EES13117 | Sorghum | endoplasmic reticulum | 55.03 | 55.69 |
| Zm00001d026639_P002 | Maize | plasma membrane | 53.85 | 55.49 |
| TraesCS2B01G596900.1 | Wheat | endoplasmic reticulum | 52.37 | 55.31 |
| KXG37573 | Sorghum | cytosol | 21.01 | 50.35 |
| HORVU0Hr1G005790.3 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.54 | 46.61 |
| AT4G24230.6 | Thale cress | endoplasmic reticulum | 18.05 | 16.67 |
Protein Annotations
| Gene3D:1.20.80.10 | Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:835428 | ProteinID:AAF08323.2 | Symbol:ACBP1 |
| ProteinID:AED96361.1 | ArrayExpress:AT5G53470 | EnsemblPlantsGene:AT5G53470 | RefSeq:AT5G53470 | TAIR:AT5G53470 | RefSeq:AT5G53470-TAIR-G |
| EnsemblPlants:AT5G53470.1 | TAIR:AT5G53470.1 | EMBL:AY059881 | EMBL:AY087475 | EMBL:AY093383 | InterPro:Acyl-CoA-binding_protein |
| InterPro:Acyl-CoA-binding_sf | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | ProteinID:BAA97324.1 | InterPro:FERM/acyl-CoA-bd_prot_sf |
| GO:GO:0000003 | GO:GO:0000062 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009409 | GO:GO:0009505 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009791 | GO:GO:0010029 | GO:GO:0010162 |
| GO:GO:0010288 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030312 | GO:GO:0032791 | GO:GO:0046872 |
| GO:GO:0048316 | GO:GO:0070300 | GO:GO:1900140 | InterPro:IPR000582 | InterPro:IPR002110 | InterPro:IPR014352 |
| InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_200159.1 | PFAM:PF00887 | PFAM:PF13857 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00689 | PFscan:PS50088 | PFscan:PS50297 | PFscan:PS51228 | PANTHER:PTHR24119 |
| PANTHER:PTHR24119:SF0 | UniProt:Q9SM23 | SMART:SM00248 | SUPFAM:SSF47027 | SUPFAM:SSF48403 | TMHMM:TMhelix |
| EMBL:U75273 | UniParc:UPI00000A8335 | SEG:seg | : | : | : |
Description
ACBP1Acyl-CoA-binding domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SM23]
Coordinates
chr5:+:21710170..21712614
Molecular Weight (calculated)
37528.7 Da
IEP (calculated)
4.247
GRAVY (calculated)
-0.475
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MADWYQLAQS IIFGLIFAYL LAKLISILLA FKDENLSLTR NHTTQSEYEN LRKVETLTGI SGETDSLIAE QGSLRGDEDE SDDDDWEGVE STELDEAFSA
101: ATAFVAAAAS DRLSQKVSNE LQLQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIDLVTQLYP AWVEGGSKRR NRSGEAAGPM
201: GPVFSSLVYE EESDNELKID AIHAFAREGE VENLLKCIEN GIPVNARDSE GRTPLHWAID RGHLNVAEAL VDKNADVNAK DNEGQTSLHY AVVCEREALA
301: EFLVKQKADT TIKDEDGNSP LDLCESEWSW MREKKDSN
101: ATAFVAAAAS DRLSQKVSNE LQLQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIDLVTQLYP AWVEGGSKRR NRSGEAAGPM
201: GPVFSSLVYE EESDNELKID AIHAFAREGE VENLLKCIEN GIPVNARDSE GRTPLHWAID RGHLNVAEAL VDKNADVNAK DNEGQTSLHY AVVCEREALA
301: EFLVKQKADT TIKDEDGNSP LDLCESEWSW MREKKDSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.