Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89227 | Canola | endoplasmic reticulum | 83.9 | 84.38 |
| CDY19024 | Canola | endoplasmic reticulum | 79.66 | 83.19 |
| Bra026307.1-P | Field mustard | endoplasmic reticulum | 80.79 | 78.57 |
| AT5G53470.1 | Thale cress | endoplasmic reticulum | 71.75 | 75.15 |
| CDY29860 | Canola | endoplasmic reticulum | 50.85 | 71.43 |
| Bra019027.1-P | Field mustard | endoplasmic reticulum | 49.15 | 69.05 |
| CDX92839 | Canola | endoplasmic reticulum | 29.94 | 63.47 |
| VIT_16s0098g01570.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 61.02 | 61.54 |
| KRH64393 | Soybean | endoplasmic reticulum | 59.32 | 60.69 |
| GSMUA_Achr4P05400_001 | Banana | cytosol | 46.89 | 60.14 |
| KRH53542 | Soybean | endoplasmic reticulum | 59.32 | 59.32 |
| PGSC0003DMT400047661 | Potato | endoplasmic reticulum | 58.19 | 59.2 |
| Solyc03g082910.2.1 | Tomato | nucleus | 57.06 | 58.38 |
| GSMUA_Achr4P04370_001 | Banana | golgi, plasma membrane | 53.11 | 55.62 |
| TraesCS2D01G600500.1 | Wheat | endoplasmic reticulum | 50.56 | 55.59 |
| TraesCS2A01G586100.1 | Wheat | endoplasmic reticulum | 50.28 | 55.28 |
| TraesCS2B01G596900.1 | Wheat | endoplasmic reticulum | 49.44 | 54.69 |
| EES13117 | Sorghum | endoplasmic reticulum | 50.56 | 53.59 |
| Zm00001d026639_P002 | Maize | plasma membrane | 49.44 | 53.35 |
| Zm00001d001798_P002 | Maize | plastid | 49.15 | 53.05 |
| KXG37573 | Sorghum | cytosol | 19.49 | 48.94 |
| HORVU0Hr1G005790.3 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.07 | 46.61 |
| AT4G24230.6 | Thale cress | endoplasmic reticulum | 17.8 | 17.21 |
Protein Annotations
| Gene3D:1.20.80.10 | Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:828891 | UniProt:A0A178V3N7 | ProteinID:AAG46057.1 |
| Symbol:ACBP2 | ProteinID:AEE85391.1 | EMBL:AF178947 | EMBL:AF320561 | ArrayExpress:AT4G27780 | EnsemblPlantsGene:AT4G27780 |
| RefSeq:AT4G27780 | TAIR:AT4G27780 | RefSeq:AT4G27780-TAIR-G | EnsemblPlants:AT4G27780.1 | TAIR:AT4G27780.1 | EMBL:AY088510 |
| EMBL:AY090256 | EMBL:AY122892 | InterPro:Acyl-CoA-binding_protein | InterPro:Acyl-CoA-binding_sf | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | Unigene:At.25382 | ProteinID:CAB43966.1 | ProteinID:CAB81427.1 | InterPro:FERM/acyl-CoA-bd_prot_sf | GO:GO:0000062 |
| GO:GO:0001666 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005778 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008289 |
| GO:GO:0009514 | GO:GO:0009628 | GO:GO:0010288 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0032791 |
| GO:GO:0046872 | InterPro:IPR000582 | InterPro:IPR002110 | InterPro:IPR014352 | InterPro:IPR020683 | InterPro:IPR036770 |
| RefSeq:NP_194507.1 | ProteinID:OAP00506.1 | PFAM:PF00887 | PFAM:PF12796 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00689 | PRINTS:PR01415 | PFscan:PS50088 |
| PFscan:PS50297 | PFscan:PS51228 | PANTHER:PTHR24119 | PANTHER:PTHR24119:SF0 | UniProt:Q9STP8 | SMART:SM00248 |
| SUPFAM:SSF47027 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI000009E397 | SEG:seg | : |
Description
ACBP2AtACBP2 [Source:UniProtKB/TrEMBL;Acc:A0A178V3N7]
Coordinates
chr4:+:13847549..13849934
Molecular Weight (calculated)
38481.5 Da
IEP (calculated)
4.162
GRAVY (calculated)
-0.447
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDWAQLAQS VILGLIFSYL LAKLISIVVT FKEDNLSLTR HPEESQLEIK PEGVDSRRLD SSCGGFGGEA DSLVAEQGSS RSDSVAGDDS EEDDDWEGVE
101: STELDEAFSA ATLFVTTAAA DRLSQKVPSD VQQQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIEIVTQLYP TWLDGGVKAG
201: SRGGDDAASN SRGTMGPVFS SLVYDEESEN ELKIDAIHGF AREGEVENLL KSIESGIPVN ARDSEGRTPL HWAIDRGHLN IAKVLVDKNA DVNAKDNEGQ
301: TPLHYAVVCD REAIAEFLVK QNANTAAKDE DGNSPLDLCE SDWPWIRDSA KQAD
101: STELDEAFSA ATLFVTTAAA DRLSQKVPSD VQQQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIEIVTQLYP TWLDGGVKAG
201: SRGGDDAASN SRGTMGPVFS SLVYDEESEN ELKIDAIHGF AREGEVENLL KSIESGIPVN ARDSEGRTPL HWAIDRGHLN IAKVLVDKNA DVNAKDNEGQ
301: TPLHYAVVCD REAIAEFLVK QNANTAAKDE DGNSPLDLCE SDWPWIRDSA KQAD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.