Factsheet for Bra026307.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001640.1-P
Bra001815.1-P
Bra010738.1-P
Bra021200.1-P
Bra022176.1-P
Bra031255.1-P
Bra033570.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27780.1	Bra001640.1-P	AT3G16770.1	15159625
AT4G27780.1	Bra021200.1-P	AT3G16770.1	15159625
AT4G27780.1	Bra022176.1-P	AT3G16770.1	15159625
AT4G27780.1	Bra001815.1-P	AT3G21150.1	21798944
AT4G27780.1	Bra031255.1-P	AT3G21150.1	21798944
AT4G27780.1	Bra010738.1-P	AT4G38580.1	18823312
AT4G27780.1	Bra033570.1-P	AT4G38580.1	18823312

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89227	Canola	endoplasmic reticulum	90.66	93.75
AT4G27780.1	Thale cress	endoplasmic reticulum	78.57	80.79
Bra022656.1-P	Field mustard	endoplasmic reticulum	67.31	71.85
Bra019027.1-P	Field mustard	endoplasmic reticulum	46.15	66.67
VIT_16s0098g01570.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	57.42	59.54
KRH64393	Soybean	endoplasmic reticulum	54.95	57.8
GSMUA_Achr4P05400_001	Banana	cytosol	43.41	57.25
Solyc03g082910.2.1	Tomato	nucleus	54.4	57.23
PGSC0003DMT400047661	Potato	endoplasmic reticulum	54.4	56.9
KRH53542	Soybean	endoplasmic reticulum	55.22	56.78
GSMUA_Achr4P04370_001	Banana	golgi, plasma membrane	50.82	54.73
TraesCS2D01G600500.1	Wheat	endoplasmic reticulum	47.8	54.04
TraesCS2A01G586100.1	Wheat	endoplasmic reticulum	47.53	53.73
TraesCS2B01G596900.1	Wheat	endoplasmic reticulum	46.43	52.81
EES13117	Sorghum	endoplasmic reticulum	47.8	52.1
Zm00001d026639_P002	Maize	plasma membrane	46.43	51.52
Zm00001d001798_P002	Maize	plastid	46.15	51.22
KXG37573	Sorghum	cytosol	18.41	47.52
HORVU0Hr1G005790.3	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.12	44.92
Bra019240.1-P	Field mustard	endoplasmic reticulum, golgi	16.21	16.3
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	15.66	15.16

Protein Annotations

Gene3D:1.20.80.10	Gene3D:1.25.40.20	MapMan:35.1	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra026307	EnsemblPlants:Bra026307.1	EnsemblPlants:Bra026307.1-P	InterPro:FERM/acyl-CoA-bd_prot_sf
GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000582	InterPro:IPR002110	InterPro:IPR014352	InterPro:IPR020683	InterPro:IPR036770
UniProt:M4EBZ8	PFAM:PF00887	PFAM:PF13857	PRINTS:PR00689	PFscan:PS50088	PFscan:PS50297
PFscan:PS51228	PANTHER:PTHR24119	PANTHER:PTHR24119:SF0	SMART:SM00248	SUPFAM:SSF47027	SUPFAM:SSF48403
TMHMM:TMhelix	UniParc:UPI0002543F1B	SEG:seg	:	:	:

Description

AT4G27780 (E=3e-095) ACBP2 | ACBP2 (ACYL-COA BINDING PROTEIN ACBP 2); acyl-CoA binding / lead ion binding

Coordinates

chrA01:+:10106480..10108240

Molecular Weight (calculated)

40115.5 Da

IEP (calculated)

4.262

GRAVY (calculated)

-0.491

Length

364 amino acids

Sequence
(BLAST)

001: MGDWAQLAQS VIIGLIFSYL LAKLISIVVT FKEDNLSLTR HHDPEPESKN LKPEVDSRRI ESSTDEADSL VAEQGSSRGD SVAGDTEEDD DDWEGVESTE
101: LDEAFSAATL FVTTAASDRL SQKVPSEVQQ QLYGLYKIVT EGPCTAPQPS ALKITARAKW QAWQKLGAMP PEEAMEKYIE IVTQLYPTWL DGGVKAGSGS
201: KDEAVSNTGG TMGPVFSSLV YEEESENELH SSMRSYSVLY LRKIDAIHEF AREGEVESLL KSIESGIPVN AKDSEGRTPL HWAIDRGHFE IAKLLVDKNA
301: DVNAKDNEGQ TPLHYAVVCD REAIAEFLVK QKANTASKDD DGNSPVDLCE SDWPWLRETA KQTD

Best Arabidopsis Sequence Match ( AT4G27780.1 )
(BLAST)

001: MGDWAQLAQS VILGLIFSYL LAKLISIVVT FKEDNLSLTR HPEESQLEIK PEGVDSRRLD SSCGGFGGEA DSLVAEQGSS RSDSVAGDDS EEDDDWEGVE
101: STELDEAFSA ATLFVTTAAA DRLSQKVPSD VQQQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIEIVTQLYP TWLDGGVKAG
201: SRGGDDAASN SRGTMGPVFS SLVYDEESEN ELKIDAIHGF AREGEVENLL KSIESGIPVN ARDSEGRTPL HWAIDRGHLN IAKVLVDKNA DVNAKDNEGQ
301: TPLHYAVVCD REAIAEFLVK QNANTAAKDE DGNSPLDLCE SDWPWIRDSA KQAD

Arabidopsis Description

ACBP2AtACBP2 [Source:UniProtKB/TrEMBL;Acc:A0A178V3N7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.