Factsheet for Bra019240.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10995	Canola	endoplasmic reticulum, golgi	99.72	99.72
Bra013778.1-P	Field mustard	endoplasmic reticulum, vacuole	51.1	49.2
AT4G24230.6	Thale cress	endoplasmic reticulum	45.58	45.08
VIT_18s0001g09340.t01	Wine grape	endoplasmic reticulum, vacuole	24.86	28.75
KRH15433	Soybean	endoplasmic reticulum, vacuole	25.97	23.68
KRH05608	Soybean	endoplasmic reticulum, vacuole	25.69	22.79
VIT_07s0129g00430.t01	Wine grape	endoplasmic reticulum, vacuole	26.24	21.11
Bra019027.1-P	Field mustard	endoplasmic reticulum	14.09	20.24
Solyc04g078090.2.1	Tomato	endoplasmic reticulum, golgi	24.86	20.18
GSMUA_AchrUn_...	Banana	golgi, nucleus, peroxisome	22.1	19.7
PGSC0003DMT400055408	Potato	vacuole	24.03	19.64
GSMUA_Achr4P19960_001	Banana	endoplasmic reticulum	22.1	19.42
Bra022656.1-P	Field mustard	endoplasmic reticulum	16.02	17.01
Bra026307.1-P	Field mustard	endoplasmic reticulum	16.3	16.21
TraesCS4A01G071200.1	Wheat	endoplasmic reticulum	22.93	15.69
Zm00001d028397_P001	Maize	endoplasmic reticulum, plasma membrane	23.48	15.62
HORVU4Hr1G063810.1	Barley	endoplasmic reticulum	22.93	15.57
TraesCS4B01G227100.1	Wheat	endoplasmic reticulum, plasma membrane	22.65	15.41
TraesCS4D01G227800.1	Wheat	endoplasmic reticulum	22.38	15.28
Os03t0243600-01	Rice	endoplasmic reticulum	22.1	14.06
EER95185	Sorghum	endoplasmic reticulum	20.17	13.13
Zm00001d015957_P001	Maize	plastid	10.77	12.7

Protein Annotations

EnsemblPlants:Bra019240.1	EnsemblPlants:Bra019240.1-P	EnsemblPlantsGene:Bra019240	Gene3D:1.20.80.10	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	InterPro:FERM/acyl-CoA-bd_prot_sf	InterPro:IPR000582	InterPro:IPR014352
PANTHER:PTHR23310	PANTHER:PTHR23310:SF96	PFAM:PF00887	PFscan:PS51228	PRINTS:PR00689	SEG:seg
SUPFAM:SSF47027	UniParc:UPI0002540FC5	UniProt:M4DRU7	MapMan:35.1	:	:

Description

AT4G24230 (E=4e-063) ACBP3 | ACBP3 (ACYL-COA-BINDING DOMAIN 3); acyl-CoA binding

Coordinates

chrA03:-:25522863..25524266

Molecular Weight (calculated)

39438.0 Da

IEP (calculated)

3.888

GRAVY (calculated)

-0.330

Length

362 amino acids

Sequence
(BLAST)

001: MEFFLEMLLT AVVAVLFSFL VAKLVSVSMV GNSGGVVNDQ AEETEIGVVA VEEELCSGLK VDAPVVQSER RLGAVVVDEN VERVDRFGSE ADRVVDEVKE
101: GTKGEDWVVT SDESSAAGSP ENVIAEEMMV CGEDKQRDAA EEFNVRTVGA ESTASVSLEN VRAEEIMIDG EEVRSEEDVI SGELVVAESE DVRVEESNTV
201: EESENKMEFN TKEGDKEEKK ELSIEEEEDD DWEGIERSEL EKAFAATSSL LEVSGKAEEV GDEVKMELYG LYMIATEGSC RETQPMAIMV SARAKWNAWQ
301: KLGNMSQEEA MEKYLALVSK EIPGLMNTVG KIPVLPPNSG SLEDPTTLGT TGVAFSKNGK TN

Best Arabidopsis Sequence Match ( AT4G24230.4 )
(BLAST)

001: MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN
101: AKICGDREAE SSAAASSENY VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG GDVLVAESEE VRVEKSSNMV
201: EESDAEAENE EKTELTIEED DDWEGIERSE LEKAFAAAVN LLEESGKAEE IGAEAKMELF GLHKIATEGS CREAQPMAVM ISARAKWNAW QKLGNMSQEE
301: AMEQYLALVS KEIPGLTKAG HTVGKMSEME TSVGLPPNSG SLEDPTNLVT TGVDESSKNG IP

Arabidopsis Description

ACBP3Acyl-CoA-binding domain 3 [Source:UniProtKB/TrEMBL;Acc:B3H4G6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.