Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0048g02770.t01 | Wine grape | nucleus | 54.46 | 49.55 |
| VIT_14s0081g00200.t01 | Wine grape | nucleus | 39.6 | 35.87 |
| VIT_07s0005g02950.t01 | Wine grape | nucleus | 37.13 | 33.48 |
Protein Annotations
| EntrezGene:100257141 | wikigene:100257141 | MapMan:15.5.52.2 | ProteinID:CCB48083 | ProteinID:CCB48083.1 | UniProt:F6H760 |
| EMBL:FN595247 | GO:GO:0003674 | GO:GO:0003713 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:1903506 | GO:GO:1903508 | EntrezGene:LOC100257141 | wikigene:LOC100257141 |
| PFAM:PF05030 | PANTHER:PTHR23107 | PANTHER:PTHR23107:SF14 | InterPro:SS18_fam | TIGR:TC53012 | UniParc:UPI000210A6AB |
| ArrayExpress:VIT_16s0098g01110 | EnsemblPlantsGene:VIT_16s0098g01110 | EnsemblPlants:VIT_16s0098g01110.t01 | unigene:Vvi.1529 | RefSeq:XP_002272754 | RefSeq:XP_002272754.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr16:+:21365303..21369314
Molecular Weight (calculated)
21964.5 Da
IEP (calculated)
7.029
GRAVY (calculated)
-0.490
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQPPQMMN IAPSFPPTAI TTEQIQKYLD ENKQLILAIL ENQNLGKLAE CAQYQAQLQK NLIYLAAIAD AQPPAPTVPP QMPIHHAMQQ GHYMQHPQAA
101: AAQQQPGMFG AKLPFQLSDQ QQQQQHHLLH LQQQQPIQGL MGMRPIINNG MHQAMQTGLG ALSGLMDVRG SKPDGSEVGS GDGQGKSASG HGSIVSTPQQ
201: FL
101: AAQQQPGMFG AKLPFQLSDQ QQQQQHHLLH LQQQQPIQGL MGMRPIINNG MHQAMQTGLG ALSGLMDVRG SKPDGSEVGS GDGQGKSASG HGSIVSTPQQ
201: FL
001: MQQQQSPQMF PMVPSIPPAN NITTEQIQKY LDENKKLIMA IMENQNLGKL AECAQYQALL QKNLMYLAAI ADAQPPPPTP GPSPSTAVAA QMATPHSGMQ
101: PPSYFMQHPQ ASPAGIFAPR GPLQFGSPLQ FQDPQQQQQI HQQAMQGHMG IRPMGMTNNG MQHAMQQPET GLGGNVGLRG GKQDGADGQG KDDGK
101: PPSYFMQHPQ ASPAGIFAPR GPLQFGSPLQ FQDPQQQQQI HQQAMQGHMG IRPMGMTNNG MQHAMQQPET GLGGNVGLRG GKQDGADGQG KDDGK
Arabidopsis Description
GIF2GRF1-interacting factor 2 [Source:UniProtKB/TrEMBL;Acc:F4HQJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.