Factsheet for VIT_19s0015g01960.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, golgi, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g02010.t01	Wine grape	extracellular	59.3	63.35
VIT_19s0015g01970.t01	Wine grape	extracellular	59.88	60.59
VIT_19s0015g01980.t01	Wine grape	plasma membrane	60.47	56.22
VIT_07s0005g05300.t01	Wine grape	cytosol	35.47	35.67

Protein Annotations

EntrezGene:104877679	MapMan:35.1	ProteinID:CBI39874	ProteinID:CBI39874.3	InterPro:Cupredoxin	UniProt:D7UAV9
EMBL:FN596747	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR008972
PFAM:PF05938	PANTHER:PTHR31232	PANTHER:PTHR31232:SF5	SUPFAM:SSF49503	InterPro:Self-incomp_S1	SignalP:SignalP-noTM
UniParc:UPI0001BE54D8	ArrayExpress:VIT_19s0015g01960	EnsemblPlantsGene:VIT_19s0015g01960	EnsemblPlants:VIT_19s0015g01960.t01	unigene:Vvi.22711	RefSeq:XP_010644752.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr19:+:10992613..10993131

Molecular Weight (calculated)

20286.0 Da

IEP (calculated)

5.729

GRAVY (calculated)

-0.470

Length

172 amino acids

Sequence
(BLAST)

001: MFLPFSRYLF SFVLLVFLVR LCDGGPWVVE KKVDLRITND LGSGLDLNLH CQSDDDDLGT HVLAPDQFFE FRFRPNFWGT TLYFCKFWWG GESHWFNIYV
101: EKRDTSRCDS KCWWMVGPVG PCLLDRRFGI YDLCENWNDP QFEGSRKKGT ENDAARVYND SKYMEGNEKR GK

Best Arabidopsis Sequence Match ( AT5G12060.1 )
(BLAST)

001: MKNILKTQVH VVVIYLLIKI AFSQVKTDFD VNWSTSKMVR ITNRLGDGLT LNLHCKSADD DLGLKILAPN GSWSFKFRTS IVGTTLFYCH FTWPGQSKRF
101: DIYDDDRDGV RSHISCINCI WDISIQGPCM FSESDHAFNI CYDWNGNLRT

Arabidopsis Description

SPH3S-protein homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMQ4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.