Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0015g02010.t01 | Wine grape | extracellular | 57.06 | 60.25 |
| VIT_19s0015g01960.t01 | Wine grape | extracellular | 60.59 | 59.88 |
| VIT_19s0015g01980.t01 | Wine grape | plasma membrane | 54.71 | 50.27 |
| VIT_07s0005g05300.t01 | Wine grape | cytosol | 40.0 | 39.77 |
Protein Annotations
| ArrayExpress:VIT_19s0015g01970 | EMBL:AM464652 | EMBL:FN596747 | EnsemblPlants:VIT_19s0015g01970.t01 | EnsemblPlantsGene:VIT_19s0015g01970 | EntrezGene:104877643 |
| InterPro:Self-incomp_S1 | PANTHER:PTHR31232 | PANTHER:PTHR31232:SF5 | PFAM:PF05938 | ProteinID:CAN83400 | ProteinID:CAN83400.1 |
| ProteinID:CBI39875 | ProteinID:CBI39875.3 | RefSeq:XP_010644707.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0001BE54D9 |
| UniProt:D7UAW0 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr19:+:11020046..11020558
Molecular Weight (calculated)
20059.9 Da
IEP (calculated)
7.406
GRAVY (calculated)
-0.318
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPFSRCLFS FVLLVFLVRW CDGAIIEKKV HVRIINDLGN GSDLNLHCKS KDDDLGVHVL APHQFFEFSF RPNFWVTTLY FCRFWWGDES HWFDIYVERR
101: DVGRCNKQCW WTVAAVGPCL LDARVQRYTL CENWKDQKPE GSSQGPKARM YNDNKHLEGN EKEGNAIIIY
101: DVGRCNKQCW WTVAAVGPCL LDARVQRYTL CENWKDQKPE GSSQGPKARM YNDNKHLEGN EKEGNAIIIY
001: MCPSSFRLIL SVILIAFLFV GLCEAHRHIN VDIINDIGPN VQLGLHCKSK GKDLGPQSLA PHQHWGFTAS LNVWETTLFF CHFVWENQSR WFDILKEKRD
101: TIVCKYHPCV WSIRPSGPCR LTDHEKCYPC NADI
101: TIVCKYHPCV WSIRPSGPCR LTDHEKCYPC NADI
Arabidopsis Description
SPH18S-protein homolog 18 [Source:UniProtKB/Swiss-Prot;Acc:B3H730]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.