Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- plasma membrane 6
- nucleus 1
- cytosol 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0015g01960.t01 | Wine grape | extracellular | 56.22 | 60.47 |
| VIT_19s0015g01970.t01 | Wine grape | extracellular | 50.27 | 54.71 |
| VIT_19s0015g02010.t01 | Wine grape | extracellular | 44.32 | 50.93 |
| VIT_07s0005g05300.t01 | Wine grape | cytosol | 31.89 | 34.5 |
Protein Annotations
| ArrayExpress:VIT_19s0015g01980 | EMBL:FN596747 | EnsemblPlants:VIT_19s0015g01980.t01 | EnsemblPlantsGene:VIT_19s0015g01980 | InterPro:Self-incomp_S1 | PANTHER:PTHR31232 |
| PANTHER:PTHR31232:SF5 | PFAM:PF05938 | ProteinID:CBI39876 | ProteinID:CBI39876.3 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0001BE54DA | UniProt:D7UAW1 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr19:+:11030365..11030922
Molecular Weight (calculated)
21696.8 Da
IEP (calculated)
8.210
GRAVY (calculated)
-0.478
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MKETKHQFTP AKKITIMFPS SRCLFSVVLL VFLVRLCDGV FIEKKVDLRI TNDLGNGLDL NLHCKSQDDD LGVHVLASHQ FFEFSFRPNF WSSTLYFCRF
101: WWRGESHWFD IYVQNRDVGR CSKKCWWMID PTGPCLLNDK VKRYTYCENW NDQQIQGSSQ IGTGNSTARM SNDPEYLEGN EKRGK
101: WWRGESHWFD IYVQNRDVGR CSKKCWWMID PTGPCLLNDK VKRYTYCENW NDQQIQGSSQ IGTGNSTARM SNDPEYLEGN EKRGK
001: MDIPKQYLSL FILIIFITTK LSQADHKNDI PVPNDPSSTN SVFPTSKRTV EINNDLGNQL TLLYHCKSKD DDLGNRTLQP GESWSFSFGR QFFGRTLYFC
101: SFSWPNESHS FDIYKDHRDS GGDNKCESDR CVWKIRRNGP CRFNDETKQF DLCYPWNKSL Y
101: SFSWPNESHS FDIYKDHRDS GGDNKCESDR CVWKIRRNGP CRFNDETKQF DLCYPWNKSL Y
Arabidopsis Description
SPH2S-protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JLQ5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.