Factsheet for Zm00001d004843_P003

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09340	Sorghum	cytosol, mitochondrion, nucleus	87.79	85.82
Zm00001d023529_P001	Maize	cytosol, mitochondrion, nucleus	75.57	71.74
Os11t0167800-01	Rice	plastid	74.05	70.29
Zm00001d025401_P001	Maize	nucleus	47.33	59.62
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, nucleus	64.89	59.44
GSMUA_Achr6P25730_001	Banana	cytosol, mitochondrion, nucleus	65.65	58.9
GSMUA_Achr8P30340_001	Banana	nucleus	62.6	56.16
Zm00001d016760_P001	Maize	cytosol, mitochondrion, nucleus	43.51	53.77
Zm00001d040785_P001	Maize	nucleus	40.46	51.96
Zm00001d040787_P001	Maize	nucleus	40.46	51.96
Zm00001d035409_P001	Maize	nucleus	54.2	42.52
HORVU4Hr1G020030.3	Barley	cytosol	28.24	26.62
Zm00001d003712_P001	Maize	nucleus	54.2	26.39

Protein Annotations

EMBL:BT042947	EMBL:EU955176	EMBL:EU956299	EMBL:EU960308	EnsemblPlants:Zm00001d004843_P003	EnsemblPlants:Zm00001d004843_T003
EnsemblPlantsGene:Zm00001d004843	EntrezGene:100281622	GO:GO:0006950	GO:GO:0008150	InterPro:ABA_WDS	PANTHER:PTHR33801
PANTHER:PTHR33801:SF9	PFAM:PF02496	ProteinID:ONM19669.1	SEG:seg	UniParc:UPI000160B6A5	UniProt:B4G0Q9
MapMan:35.2	:	:	:	:	:

Description

abscisic acid stress ripening2 abscisic acid stress ripening2

Coordinates

chr2:+:143855973..143857138

Molecular Weight (calculated)

14905.0 Da

IEP (calculated)

6.644

GRAVY (calculated)

-1.373

Length

131 amino acids

Sequence
(BLAST)

001: MSEEKHHHFF NHHKKDEEQP AGEYGYSETE VVTATGEGEY ERYKKEEKEH KHKQHLGEAG AIAAGAFALY EKHEAKKDPE HAHRHKITEE VAAAAAVGAG
101: GYVFHEHHEK KKDHKDAEEA SGEKKHHHLF G

Best Arabidopsis Sequence Match ( AT4G21750.1 )
(BLAST)

001: MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA

Arabidopsis Description

ATML1ATML1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ61]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.