Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004843_P003 | Maize | extracellular | 71.74 | 75.57 |
| KXG23047 | Sorghum | cytosol, mitochondrion, nucleus | 78.26 | 74.48 |
| Zm00001d025401_P001 | Maize | nucleus | 48.55 | 64.42 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus | 63.04 | 60.84 |
| GSMUA_Achr6P25730_001 | Banana | cytosol, mitochondrion, nucleus | 60.14 | 56.85 |
| GSMUA_Achr8P30340_001 | Banana | nucleus | 60.14 | 56.85 |
| TraesCS4D01G109500.1 | Wheat | cytosol, mitochondrion, nucleus | 55.8 | 56.2 |
| Zm00001d040785_P001 | Maize | nucleus | 41.3 | 55.88 |
| Zm00001d040787_P001 | Maize | nucleus | 41.3 | 55.88 |
| Zm00001d016760_P001 | Maize | cytosol, mitochondrion, nucleus | 42.75 | 55.66 |
| TraesCS4B01G112000.1 | Wheat | cytosol, mitochondrion, nucleus | 55.07 | 55.07 |
| TraesCS4A01G208400.1 | Wheat | nucleus | 50.0 | 51.49 |
| Zm00001d035409_P001 | Maize | nucleus | 47.83 | 39.52 |
| Zm00001d003712_P001 | Maize | nucleus | 54.35 | 27.88 |
Protein Annotations
| EMBL:BT037603 | EMBL:EU952401 | EnsemblPlants:Zm00001d023529_P001 | EnsemblPlants:Zm00001d023529_T001 | EnsemblPlantsGene:Zm00001d023529 | EntrezGene:542304 |
| GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 | PANTHER:PTHR33801:SF9 | PFAM:PF02496 |
| ProteinID:AQK39495.1 | SEG:seg | UniParc:UPI00017B737B | UniProt:B4FKG5 | MapMan:35.2 | : |
Description
abscisic acid stress ripening1 abscisic acid stress ripening1
Coordinates
chr10:-:8781222..8782218
Molecular Weight (calculated)
15543.6 Da
IEP (calculated)
6.339
GRAVY (calculated)
-1.264
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEKHHHHH LFHHKKDEEQ LAAGGYGESA EYTEATVTEV VSTGENEYDE YKKEEKEHKH KQHLGEAGAI AAGAFALYEK HEAKKDPEHA HRHKIEEEVA
101: AAAAVGSGGF AFHEHHEKKK DHKEAEEAGG EKKHHFFG
101: AAAAVGSGGF AFHEHHEKKK DHKEAEEAGG EKKHHFFG
001: MVEQRYEDGS RLVAGCIPFR YVNSDKDGNS ESGKVIQVLM ISSSSGPGLL FPKGGWENDE TVREAAAREA VEEAGVRGIL MDFLGNYEFK SKSHQDEFSP
101: EGLCKAAMYA LYVKEELATW PEHETRTRKW LTIEEAVESC RHPWMKDALV EGFCKWHKEK MVKGEEITGE H
101: EGLCKAAMYA LYVKEELATW PEHETRTRKW LTIEEAVESC RHPWMKDALV EGFCKWHKEK MVKGEEITGE H
Arabidopsis Description
NUDT16Nudix hydrolase 16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LHK1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.