Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G109500.1 | Wheat | cytosol, mitochondrion, nucleus | 92.03 | 92.7 |
| TraesCS4A01G208400.1 | Wheat | nucleus | 78.99 | 81.34 |
| KXG23047 | Sorghum | cytosol, mitochondrion, nucleus | 59.42 | 56.55 |
| HORVU4Hr1G020030.3 | Barley | cytosol | 56.52 | 56.12 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus | 57.97 | 55.94 |
| Zm00001d023529_P001 | Maize | cytosol, mitochondrion, nucleus | 55.07 | 55.07 |
| GSMUA_Achr8P30340_001 | Banana | nucleus | 57.25 | 54.11 |
| GSMUA_Achr6P25730_001 | Banana | cytosol, mitochondrion, nucleus | 56.52 | 53.42 |
| Os11t0167800-01 | Rice | plastid | 52.9 | 52.9 |
| TraesCS3B01G578800.1 | Wheat | nucleus | 36.96 | 52.58 |
| TraesCS3B01G456200.1 | Wheat | nucleus | 36.23 | 50.0 |
| TraesCS2B01G317600.1 | Wheat | nucleus | 44.2 | 21.86 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G112000.1 | EnsemblPlantsGene:TraesCS4B01G112000 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF9 | PFAM:PF02496 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr4B:+:125481409..125482171
Molecular Weight (calculated)
15461.7 Da
IEP (calculated)
6.630
GRAVY (calculated)
-1.199
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEKHHHHL FHHKKEGEDF QPAADGGVDM YGYSTETVVT ATGNEGEYER ITKEEKHHKH KEHLGEMGAA AAGAFALYEK HEAKKDPEHA HKHKIEEEVA
101: AAAAVGAGGF VFHEHHEKKQ DHKEAKEASG EKKHHHFG
101: AAAAVGAGGF VFHEHHEKKQ DHKEAKEASG EKKHHHFG
001: MSVACGLECV FCVGFSRWAW KRCTHVGSDD SATWTSATPE EFEPIPRISR VILAVYEPDL RNPKISPSLG TFDLNPEWVI KRVTHEKTQG RSPPYIIYID
101: HDHREIVLAI RGLNLAKESD YKILLDNKLG QKMLGGGYVH RGLLKSAAWV LNQESETLWR VWEENGREYD LVFAGHSLGS GVAALMAVLV VNTPAMIGDI
201: PRNKVRCFAL APARCMSLNL AVKYADVISS VILQDDFLPR TATPLEDIFK SVFCLPCLLF LVCLRDTFIP EGRKLRDPRR LYAPGRIYHI VERKFCRCGR
301: FPPEVRTAIP VDGRFEHIVL SSNATSDHAI LWIEREAEKA LQILREKSSE TVVTMAPKEK RMERLSTLEK EHKDALERAV SLNIPHAVST AEEEEECNNG
401: EASAELKTKK KNWDEVVDKL FHRSNSGEFV LNDNVVPER
101: HDHREIVLAI RGLNLAKESD YKILLDNKLG QKMLGGGYVH RGLLKSAAWV LNQESETLWR VWEENGREYD LVFAGHSLGS GVAALMAVLV VNTPAMIGDI
201: PRNKVRCFAL APARCMSLNL AVKYADVISS VILQDDFLPR TATPLEDIFK SVFCLPCLLF LVCLRDTFIP EGRKLRDPRR LYAPGRIYHI VERKFCRCGR
301: FPPEVRTAIP VDGRFEHIVL SSNATSDHAI LWIEREAEKA LQILREKSSE TVVTMAPKEK RMERLSTLEK EHKDALERAV SLNIPHAVST AEEEEECNNG
401: EASAELKTKK KNWDEVVDKL FHRSNSGEFV LNDNVVPER
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G37710]
SUBAcon: [mitochondrion,plastid,extracellular,cytosol]
SUBAcon: [mitochondrion,plastid,extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.