Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G301500.1 | Wheat | nucleus | 89.25 | 94.32 |
| TraesCS2D01G300100.1 | Wheat | nucleus | 78.85 | 83.97 |
| TraesCS3B01G578800.1 | Wheat | nucleus | 17.92 | 51.55 |
| TraesCS3B01G456200.1 | Wheat | nucleus | 17.92 | 50.0 |
| Zm00001d003712_P001 | Maize | nucleus | 44.09 | 45.72 |
| GSMUA_Achr3P19130_001 | Banana | nucleus | 22.94 | 44.76 |
| TraesCS4B01G112000.1 | Wheat | cytosol, mitochondrion, nucleus | 21.86 | 44.2 |
| EES12155 | Sorghum | nucleus | 38.71 | 40.15 |
| GSMUA_Achr8P17320_001 | Banana | nucleus | 25.45 | 38.17 |
| Os04t0423400-01 | Rice | cytosol, nucleus | 29.75 | 36.24 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G317600.1 | EnsemblPlantsGene:TraesCS2B01G317600 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF6 | PFAM:PF02496 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2B:+:453077970..453078937
Molecular Weight (calculated)
30340.9 Da
IEP (calculated)
4.741
GRAVY (calculated)
-1.760
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEYGRSGY GRSGAGDDYD NKTSNEGYDR REGGYNKSGA DDYEQDRSSG RGGYNKSTGD DEYSGAGYKK SGGDDYDTGY NKQSSNEDYG RNKSGSDDYD
101: RSAGGYKKSG GDDDEYSGGG YKKSGGDDEY SGGGYKKTGG DDDEYSGGGY KKSGGDDEYS GGGYKKSGGD DTEYGSSRDE TEKYRKEEKE HKHKEHLGEI
201: GTLASGAFAM YEKHQVKKDP ENAHRHKIEE EVAAVAAVGS GGYAFHEHHE KKEYKESAED GEDEESGRGE GKKKHHFFG
101: RSAGGYKKSG GDDDEYSGGG YKKSGGDDEY SGGGYKKTGG DDDEYSGGGY KKSGGDDEYS GGGYKKSGGD DTEYGSSRDE TEKYRKEEKE HKHKEHLGEI
201: GTLASGAFAM YEKHQVKKDP ENAHRHKIEE EVAAVAAVGS GGYAFHEHHE KKEYKESAED GEDEESGRGE GKKKHHFFG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.