Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G301500.1 | Wheat | nucleus | 87.4 | 86.74 |
| TraesCS2B01G317600.1 | Wheat | nucleus | 83.97 | 78.85 |
| TraesCS3D01G517600.1 | Wheat | nucleus | 19.08 | 54.95 |
| TraesCS3D01G517700.1 | Wheat | nucleus | 19.47 | 54.26 |
| TraesCS3D01G517500.1 | Wheat | nucleus | 19.08 | 53.19 |
| TraesCS3D01G518000.1 | Wheat | nucleus | 18.32 | 49.48 |
| TraesCS3D01G518100.1 | Wheat | nucleus | 17.56 | 46.0 |
| GSMUA_Achr3P19130_001 | Banana | nucleus | 24.81 | 45.45 |
| TraesCS4D01G109500.1 | Wheat | cytosol, mitochondrion, nucleus | 23.28 | 44.53 |
| Zm00001d003712_P001 | Maize | nucleus | 45.42 | 44.24 |
| EES12155 | Sorghum | nucleus | 40.46 | 39.41 |
| GSMUA_Achr8P17320_001 | Banana | nucleus | 27.1 | 38.17 |
| Os04t0423400-01 | Rice | cytosol, nucleus | 32.06 | 36.68 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G300100.1 | EnsemblPlantsGene:TraesCS2D01G300100 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF6 | PFAM:PF02496 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2D:+:382195603..382196510
Molecular Weight (calculated)
28652.2 Da
IEP (calculated)
5.022
GRAVY (calculated)
-1.735
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEYGRGGY GRSAAGDDYD NKTSNEGYDR REGGYNKSGA DDYEHERSSG RGGYNKSTGD DEYSGAGYKK SGGDNYDTGY NKQSSNEEYG RNKPGSDDYD
101: RSAGGYKKSG DDEYSGGGYK KAGGDDEYSG GGYKKSGGDD EYSGGGYKKS GGDDTEYGSS RDETEKYRKE EKEHKHKEHL GEIGTLASGA FAMYEKHQVK
201: KDPENAHRHK IEEEVAAVAA VGSGGYAFHE HHEKKEYKES AEDGEDEESG RGEGKKKHHF FG
101: RSAGGYKKSG DDEYSGGGYK KAGGDDEYSG GGYKKSGGDD EYSGGGYKKS GGDDTEYGSS RDETEKYRKE EKEHKHKEHL GEIGTLASGA FAMYEKHQVK
201: KDPENAHRHK IEEEVAAVAA VGSGGYAFHE HHEKKEYKES AEDGEDEESG RGEGKKKHHF FG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.