Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P25740_001 | Banana | cytosol, mitochondrion, nucleus | 39.78 | 71.84 |
| GSMUA_Achr6P25730_001 | Banana | cytosol, mitochondrion, nucleus | 54.84 | 69.86 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus | 52.15 | 67.83 |
| GSMUA_Achr8P30340_001 | Banana | nucleus | 49.46 | 63.01 |
| GSMUA_Achr3P19130_001 | Banana | nucleus | 43.55 | 56.64 |
| Zm00001d003712_P001 | Maize | nucleus | 43.01 | 29.74 |
| EES12155 | Sorghum | nucleus | 41.4 | 28.62 |
| TraesCS2D01G300100.1 | Wheat | nucleus | 38.17 | 27.1 |
| TraesCS2A01G301500.1 | Wheat | nucleus | 38.17 | 26.89 |
| TraesCS2B01G317600.1 | Wheat | nucleus | 38.17 | 25.45 |
| Os04t0423400-01 | Rice | cytosol, nucleus | 31.18 | 25.33 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P17320_001 | EnsemblPlants:GSMUA_Achr8T17320_001 | EnsemblPlantsGene:GSMUA_Achr8G17320_001 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS |
| PANTHER:PTHR33801 | PANTHER:PTHR33801:SF9 | PFAM:PF02496 | SEG:seg | UniParc:UPI000294C66C | UniProt:M0TR85 |
| MapMan:35.2 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G17320_001]
Coordinates
chr8:+:16824785..16825648
Molecular Weight (calculated)
20743.2 Da
IEP (calculated)
5.969
GRAVY (calculated)
-1.189
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEKHHHHH HFFHHHKNEE DEKPAEEVIY SHTAYTSGGG VYAADDAYTG GEYSTGYGQT AGGAYADDAD SAGSGYTTGY SQTAEEAMVT ESSIDEYDKY
101: KKEEKQHKHK EHVGEMGALA AGAFALYEKH EANKDPEHAH RHKIEEEIAA AVAVGGGGYA FHEHHEKKEA KEETKEAHEK KHHHFF
101: KKEEKQHKHK EHVGEMGALA AGAFALYEKH EANKDPEHAH RHKIEEEIAA AVAVGGGGYA FHEHHEKKEA KEETKEAHEK KHHHFF
001: MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V
Arabidopsis Description
BGAL10Beta-galactosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN08]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.