Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P25740_001 | Banana | cytosol, mitochondrion, nucleus | 42.66 | 59.22 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus | 56.64 | 56.64 |
| GSMUA_Achr6P25730_001 | Banana | cytosol, mitochondrion, nucleus | 55.94 | 54.79 |
| GSMUA_Achr8P30340_001 | Banana | nucleus | 54.55 | 53.42 |
| GSMUA_Achr8P17320_001 | Banana | nucleus | 56.64 | 43.55 |
| Zm00001d003712_P001 | Maize | nucleus | 48.25 | 25.65 |
| EES12155 | Sorghum | nucleus | 47.55 | 25.28 |
| TraesCS2D01G300100.1 | Wheat | nucleus | 45.45 | 24.81 |
| TraesCS2A01G301500.1 | Wheat | nucleus | 44.76 | 24.24 |
| TraesCS2B01G317600.1 | Wheat | nucleus | 44.76 | 22.94 |
| Os04t0423400-01 | Rice | cytosol, nucleus | 31.47 | 19.65 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P19130_001 | EnsemblPlants:GSMUA_Achr3T19130_001 | EnsemblPlantsGene:GSMUA_Achr3G19130_001 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS |
| PANTHER:PTHR33801 | PFAM:PF02496 | SEG:seg | UniParc:UPI0002952F7B | UniProt:M0SFX9 | MapMan:35.2 |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G19130_001]
Coordinates
chr3:+:20528370..20529228
Molecular Weight (calculated)
16310.7 Da
IEP (calculated)
6.861
GRAVY (calculated)
-1.316
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQHHQHHH HLIHHHKEAN PADEVVYTET GSTGKDGYTT GYVKTTEVVT NDGGYEYRKE EKQHKHREHL GEMGALAAGA FAEHEKHKVE KDPEHARRHK
101: MEAEIGMAMA VGSGGYAAHE HHERKEAKEQ AEEAHGKKHH HFF
101: MEAEIGMAMA VGSGGYAAHE HHERKEAKEQ AEEAHGKKHH HFF
001: MIPNQRQNLV SILRVCTRKG LSDQGGQVHC YLLKSGSGLN LITSNYLIDM YCKCREPLMA YKVFDSMPER NVVSWSALMS GHVLNGDLKG SLSLFSEMGR
101: QGIYPNEFTF STNLKACGLL NALEKGLQIH GFCLKIGFEM MVEVGNSLVD MYSKCGRINE AEKVFRRIVD RSLISWNAMI AGFVHAGYGS KALDTFGMMQ
201: EANIKERPDE FTLTSLLKAC SSTGMIYAGK QIHGFLVRSG FHCPSSATIT GSLVDLYVKC GYLFSARKAF DQIKEKTMIS WSSLILGYAQ EGEFVEAMGL
301: FKRLQELNSQ IDSFALSSII GVFADFALLR QGKQMQALAV KLPSGLETSV LNSVVDMYLK CGLVDEAEKC FAEMQLKDVI SWTVVITGYG KHGLGKKSVR
401: IFYEMLRHNI EPDEVCYLAV LSACSHSGMI KEGEELFSKL LETHGIKPRV EHYACVVDLL GRAGRLKEAK HLIDTMPIKP NVGIWQTLLS LCRVHGDIEL
501: GKEVGKILLR IDAKNPANYV MMSNLYGQAG YWNEQGNARE LGNIKGLKKE AGMSWVEIER EVHFFRSGED SHPLTPVIQE TLKEAERRLR EELGYVYGLK
601: HELHDIDDES KEENLRAHSE KLAIGLALAT GGLNQKGKTI RVFKNLRVCV DCHEFIKGLS KITKIAYVVR DAVRFHSFED GCCSCGDYW
101: QGIYPNEFTF STNLKACGLL NALEKGLQIH GFCLKIGFEM MVEVGNSLVD MYSKCGRINE AEKVFRRIVD RSLISWNAMI AGFVHAGYGS KALDTFGMMQ
201: EANIKERPDE FTLTSLLKAC SSTGMIYAGK QIHGFLVRSG FHCPSSATIT GSLVDLYVKC GYLFSARKAF DQIKEKTMIS WSSLILGYAQ EGEFVEAMGL
301: FKRLQELNSQ IDSFALSSII GVFADFALLR QGKQMQALAV KLPSGLETSV LNSVVDMYLK CGLVDEAEKC FAEMQLKDVI SWTVVITGYG KHGLGKKSVR
401: IFYEMLRHNI EPDEVCYLAV LSACSHSGMI KEGEELFSKL LETHGIKPRV EHYACVVDLL GRAGRLKEAK HLIDTMPIKP NVGIWQTLLS LCRVHGDIEL
501: GKEVGKILLR IDAKNPANYV MMSNLYGQAG YWNEQGNARE LGNIKGLKKE AGMSWVEIER EVHFFRSGED SHPLTPVIQE TLKEAERRLR EELGYVYGLK
601: HELHDIDDES KEENLRAHSE KLAIGLALAT GGLNQKGKTI RVFKNLRVCV DCHEFIKGLS KITKIAYVVR DAVRFHSFED GCCSCGDYW
Arabidopsis Description
PCMP-H86Putative pentatricopeptide repeat-containing protein At3g15130 [Source:UniProtKB/Swiss-Prot;Acc:P0C898]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.