Factsheet for GSMUA_Achr6P25740_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025401_P001	Maize	nucleus	69.9	69.23
EES12153	Sorghum	nucleus	66.99	68.32
KRH08687	Soybean	cytosol, mitochondrion, nucleus	71.84	66.67
TraesCS3A01G509700.1	Wheat	nucleus	59.22	64.89
TraesCS3D01G517600.1	Wheat	nucleus	57.28	64.84
PGSC0003DMT400061912	Potato	cytosol, mitochondrion, nucleus	67.96	64.81
Zm00001d016760_P001	Maize	cytosol, mitochondrion, nucleus	66.02	64.15
Solyc04g071590.1.1	Tomato	nucleus	66.99	63.89
TraesCS3D01G517700.1	Wheat	nucleus	57.28	62.77
TraesCS3D01G517500.1	Wheat	nucleus	57.28	62.77
EES06935	Sorghum	cytosol, mitochondrion, nucleus	65.05	62.62
Solyc04g071600.2.1	Tomato	cytosol, mitochondrion, nucleus	65.05	62.04
Os01t0959100-01	Rice	nucleus	56.31	60.42
EES00725	Sorghum	nucleus	59.22	60.4
PGSC0003DMT400017061	Potato	cytosol, mitochondrion, nucleus	65.05	60.36
TraesCS3B01G578800.1	Wheat	nucleus	56.31	59.79
Solyc04g071580.2.1	Tomato	cytosol, mitochondrion, nucleus	66.02	59.65
PGSC0003DMT400017059	Potato	cytosol, mitochondrion, nucleus	63.11	59.63
Solyc04g071610.2.1	Tomato	extracellular	63.11	59.09
Zm00001d040785_P001	Maize	nucleus	58.25	58.82
TraesCS3D01G518000.1	Wheat	nucleus	55.34	58.76
TraesCS3A01G509400.1	Wheat	nucleus	54.37	57.73
Zm00001d040787_P001	Maize	nucleus	56.31	56.86
TraesCS3B01G456200.1	Wheat	nucleus	53.4	55.0
TraesCS3D01G518100.1	Wheat	nucleus	53.4	55.0
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, nucleus	72.82	52.45
TraesCSU01G240200.1	Wheat	nucleus	55.34	51.82
TraesCS3A01G509500.1	Wheat	nucleus	55.34	51.82
TraesCS3A01G510700.1	Wheat	nucleus	55.34	51.82
TraesCS3A01G509200.1	Wheat	nucleus	55.34	51.82
GSMUA_Achr6P25730_001	Banana	cytosol, mitochondrion, nucleus	70.87	50.0
GSMUA_Achr8P30340_001	Banana	nucleus	69.9	49.32
Os01t0959200-01	Rice	nucleus	55.34	49.14
HORVU3Hr1G112050.2	Barley	plastid	57.28	45.38
GSMUA_Achr3P19130_001	Banana	nucleus	59.22	42.66
GSMUA_Achr8P17320_001	Banana	nucleus	71.84	39.78
HORVU3Hr1G112060.2	Barley	cytosol	46.6	39.34
HORVU3Hr1G112080.1	Barley	cytosol, nucleus	50.49	39.1
VIT_18s0072g00380.t01	Wine grape	plastid	68.93	33.97
KRH35137	Soybean	nucleus	69.9	33.8
KRG91659	Soybean	nucleus	68.93	29.83
PGSC0003DMT400017057	Potato	extracellular, nucleus	64.08	21.57

Protein Annotations

EnsemblPlants:GSMUA_Achr6P25740_001	EnsemblPlants:GSMUA_Achr6T25740_001	EnsemblPlantsGene:GSMUA_Achr6G25740_001	GO:GO:0006950	GO:GO:0008150	InterPro:ABA_WDS
PANTHER:PTHR33801	PANTHER:PTHR33801:SF15	PFAM:PF02496	SEG:seg	UniParc:UPI0002956B9C	UniProt:M0TA70
MapMan:35.2	:	:	:	:	:

Description

Abscisic stress-ripening protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G25740_001]

Coordinates

chr6:+:26768767..26769666

Molecular Weight (calculated)

11739.5 Da

IEP (calculated)

6.944

GRAVY (calculated)

-1.335

Length

103 amino acids

Sequence
(BLAST)

001: MAEEEQKHHH HFFHHHKDEE SPSEVDPKKE EKHHKHKEHL GELGALAAGA YALHEKHQAK KDPENAHKHK VAEEIAATVA VGSAGFAFHE HHEKKEAKKH
101: ACE

Best Arabidopsis Sequence Match ( AT2G02220.1 )
(BLAST)

0001: MRVHRFCVIV IFLTELLCFF YSSESQTTSR CHPHDLEALR DFIAHLEPKP DGWINSSSST DCCNWTGITC NSNNTGRVIR LELGNKKLSG KLSESLGKLD
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV

Arabidopsis Description

PSKR1Phytosulfokine receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.