Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0959100-01 | Rice | nucleus | 58.62 | 70.83 |
| Zm00001d040785_P001 | Maize | nucleus | 60.34 | 68.63 |
| Zm00001d040787_P001 | Maize | nucleus | 58.62 | 66.67 |
| EES00725 | Sorghum | nucleus | 57.76 | 66.34 |
| PGSC0003DMT400017059 | Potato | cytosol, mitochondrion, nucleus | 54.31 | 57.8 |
| Solyc04g071610.2.1 | Tomato | extracellular | 53.45 | 56.36 |
| GSMUA_Achr6P25740_001 | Banana | cytosol, mitochondrion, nucleus | 49.14 | 55.34 |
| KRH08687 | Soybean | cytosol, mitochondrion, nucleus | 50.86 | 53.15 |
| PGSC0003DMT400061912 | Potato | cytosol, mitochondrion, nucleus | 45.69 | 49.07 |
| Solyc04g071600.2.1 | Tomato | cytosol, mitochondrion, nucleus | 45.69 | 49.07 |
| PGSC0003DMT400017061 | Potato | cytosol, mitochondrion, nucleus | 46.55 | 48.65 |
| Solyc04g071580.2.1 | Tomato | cytosol, mitochondrion, nucleus | 47.41 | 48.25 |
| Solyc04g071590.1.1 | Tomato | nucleus | 44.83 | 48.15 |
| HORVU3Hr1G112060.2 | Barley | cytosol | 48.28 | 45.9 |
| HORVU3Hr1G112080.1 | Barley | cytosol, nucleus | 48.28 | 42.11 |
| Os11t0167800-01 | Rice | plastid | 41.38 | 34.78 |
| VIT_18s0072g00380.t01 | Wine grape | plastid | 50.0 | 27.75 |
| KRH35137 | Soybean | nucleus | 50.86 | 27.7 |
| KRG91659 | Soybean | nucleus | 50.0 | 24.37 |
| PGSC0003DMT400017057 | Potato | extracellular, nucleus | 44.83 | 16.99 |
| Os04t0423400-01 | Rice | cytosol, nucleus | 32.76 | 16.59 |
Protein Annotations
| EnsemblPlants:Os01t0959200-01 | EnsemblPlantsGene:Os01g0959200 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF2 | PFAM:PF02496 | ProteinID:BAS76319.1 | SEG:seg | UniParc:UPI00039393D3 | UniProt:A0A0P0VD37 |
| MapMan:35.2 | : | : | : | : | : |
Description
ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 4 PROTEINSimilar to Ci21A protein. (Os01t0959200-01)
Coordinates
chr1:+:42282832..42283619
Molecular Weight (calculated)
13048.6 Da
IEP (calculated)
10.542
GRAVY (calculated)
-1.175
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: LTKFPRTYVH KMFGHHKNEE KMAAAGAAPK DAGDYRKEEK HHKHMEQIAK LGAAAAGAYA MHEKKQAKKD PEHARSHKMK EGIAAAVAVG SAGFALHEHH
101: EKKEAKKHRR HAHHHH
101: EKKEAKKHRR HAHHHH
001: MKTVKSLPIL AMLLGVIIVA AAISTVSVEG RKHHVKKIKP KHRRHSKNTP TGSPAPAPYP STNEGVFNIF SYGAKGDGVS DDSKALVGAW KAACKVVGGK
101: VEIPAGTQFL VKAVTLQGPC KEETVVQIEG ILVAPEKIGS WPNSSLFQWL NFKWVSHLTI QGSGTLNGRG YNWWNLDTYQ TQTRNKYIPP MKPTALRFYS
201: SNNVTVRDIS IVNSPLCHLK FDDSDGVKVN NITISSPENS PNTDGIHLQN TRNVEIQHSN IACGDDCVSI QTGSSNVHIH HINCGPGHGI SIGGLGKDKS
301: VACVSDIIVE DISIQNTLAG VRIKTWQGGL GVVKNLTFSN IQVKDVKVPI VIDQYYCDKS KCKNQTRAVS ISGVKYNNIV GSFTVQPVRI ACSNNVPCMD
401: VDLMDIRLRP SGGIRGLQTH QQQQALCWNS YGKTQGPLVP SSIGYCLRKS NIGGYYSQKV SRSYDKICPS
101: VEIPAGTQFL VKAVTLQGPC KEETVVQIEG ILVAPEKIGS WPNSSLFQWL NFKWVSHLTI QGSGTLNGRG YNWWNLDTYQ TQTRNKYIPP MKPTALRFYS
201: SNNVTVRDIS IVNSPLCHLK FDDSDGVKVN NITISSPENS PNTDGIHLQN TRNVEIQHSN IACGDDCVSI QTGSSNVHIH HINCGPGHGI SIGGLGKDKS
301: VACVSDIIVE DISIQNTLAG VRIKTWQGGL GVVKNLTFSN IQVKDVKVPI VIDQYYCDKS KCKNQTRAVS ISGVKYNNIV GSFTVQPVRI ACSNNVPCMD
401: VDLMDIRLRP SGGIRGLQTH QQQQALCWNS YGKTQGPLVP SSIGYCLRKS NIGGYYSQKV SRSYDKICPS
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q38958]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.