Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08687 | Soybean | cytosol, mitochondrion, nucleus | 38.24 | 81.98 |
| KRH35137 | Soybean | nucleus | 73.11 | 81.69 |
| EES12153 | Sorghum | nucleus | 29.41 | 69.31 |
| GSMUA_Achr6P25740_001 | Banana | cytosol, mitochondrion, nucleus | 29.83 | 68.93 |
| PGSC0003DMT400061912 | Potato | cytosol, mitochondrion, nucleus | 30.25 | 66.67 |
| Solyc04g071610.2.1 | Tomato | extracellular | 30.67 | 66.36 |
| PGSC0003DMT400017059 | Potato | cytosol, mitochondrion, nucleus | 29.83 | 65.14 |
| Solyc04g071590.1.1 | Tomato | nucleus | 29.41 | 64.81 |
| Solyc04g071580.2.1 | Tomato | cytosol, mitochondrion, nucleus | 30.67 | 64.04 |
| Solyc04g071600.2.1 | Tomato | cytosol, mitochondrion, nucleus | 28.99 | 63.89 |
| Zm00001d025401_P001 | Maize | nucleus | 27.73 | 63.46 |
| Zm00001d040785_P001 | Maize | nucleus | 26.89 | 62.75 |
| EES00725 | Sorghum | nucleus | 26.47 | 62.38 |
| PGSC0003DMT400017061 | Potato | cytosol, mitochondrion, nucleus | 28.99 | 62.16 |
| Zm00001d040787_P001 | Maize | nucleus | 26.47 | 61.76 |
| TraesCS3D01G517600.1 | Wheat | nucleus | 23.53 | 61.54 |
| Zm00001d016760_P001 | Maize | cytosol, mitochondrion, nucleus | 26.89 | 60.38 |
| EES06935 | Sorghum | cytosol, mitochondrion, nucleus | 26.89 | 59.81 |
| TraesCS3B01G578800.1 | Wheat | nucleus | 23.95 | 58.76 |
| TraesCS3D01G517500.1 | Wheat | nucleus | 23.11 | 58.51 |
| TraesCS3D01G517700.1 | Wheat | nucleus | 23.11 | 58.51 |
| TraesCS3A01G509700.1 | Wheat | nucleus | 23.11 | 58.51 |
| Os01t0959100-01 | Rice | nucleus | 23.53 | 58.33 |
| TraesCS3A01G509400.1 | Wheat | nucleus | 23.53 | 57.73 |
| TraesCS3D01G518000.1 | Wheat | nucleus | 23.11 | 56.7 |
| TraesCS3B01G456200.1 | Wheat | nucleus | 23.11 | 55.0 |
| TraesCS3D01G518100.1 | Wheat | nucleus | 22.27 | 53.0 |
| Os01t0959200-01 | Rice | nucleus | 24.37 | 50.0 |
| TraesCS3A01G509500.1 | Wheat | nucleus | 22.69 | 49.09 |
| TraesCS3A01G510700.1 | Wheat | nucleus | 22.69 | 49.09 |
| TraesCS3A01G509200.1 | Wheat | nucleus | 22.69 | 49.09 |
| TraesCSU01G240200.1 | Wheat | nucleus | 22.69 | 49.09 |
| HORVU3Hr1G112050.2 | Barley | plastid | 24.79 | 45.38 |
| VIT_18s0072g00380.t01 | Wine grape | plastid | 39.5 | 44.98 |
| HORVU3Hr1G112060.2 | Barley | cytosol | 19.75 | 38.52 |
| HORVU3Hr1G112080.1 | Barley | cytosol, nucleus | 21.01 | 37.59 |
| PGSC0003DMT400017057 | Potato | extracellular, nucleus | 40.76 | 31.7 |
Protein Annotations
| EMBL:ACUP02012696 | EMBL:AY382827 | EnsemblPlants:KRG91659 | EnsemblPlantsGene:GLYMA_20G167500 | EntrezGene:732594 | GO:GO:0006950 |
| GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 | PANTHER:PTHR33801:SF7 | PFAM:PF02496 | ProteinID:KRG91659 |
| ProteinID:KRG91659.1 | SEG:seg | UniParc:UPI0000679744 | UniProt:Q2TUW1 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr20:-:40537001..40539123
Molecular Weight (calculated)
25355.0 Da
IEP (calculated)
5.918
GRAVY (calculated)
-1.303
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEKHHKHR LFHHHKDEDN KPVETDTGYD NTSYSKPSDD YDSGFNKPSY ESSGGGYEGG YNKTSYSSDE PASGGGYEGG YKKTGYSGGI DETSGGYGAG
101: GGGYSDVTDG GYGKPSGGYG AAGGGGVYPD TTTDGGYSKT SGGGYDDEVD YKKEEKHHKH LEHLGELGAA SAAAYALHEK HKAEKDPEHA HRHKIEEEVA
201: AAAAVGSGGF AFHEHHEKKE AKEQDEEAHG KKHHHLFG
101: GGGYSDVTDG GYGKPSGGYG AAGGGGVYPD TTTDGGYSKT SGGGYDDEVD YKKEEKHHKH LEHLGELGAA SAAAYALHEK HKAEKDPEHA HRHKIEEEVA
201: AAAAVGSGGF AFHEHHEKKE AKEQDEEAHG KKHHHLFG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.