CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025401_P001	Maize	nucleus	89.11	86.54
EES06935	Sorghum	cytosol, mitochondrion, nucleus	78.22	73.83
PGSC0003DMT400061912	Potato	cytosol, mitochondrion, nucleus	76.24	71.3
Solyc04g071600.2.1	Tomato	cytosol, mitochondrion, nucleus	74.26	69.44
PGSC0003DMT400017061	Potato	cytosol, mitochondrion, nucleus	75.25	68.47
GSMUA_Achr6P25740_001	Banana	cytosol, mitochondrion, nucleus	68.32	66.99
Solyc04g071590.1.1	Tomato	nucleus	71.29	66.67
EES00725	Sorghum	nucleus	65.35	65.35
PGSC0003DMT400017059	Potato	cytosol, mitochondrion, nucleus	70.3	65.14
Solyc04g071610.2.1	Tomato	extracellular	70.3	64.55
Solyc04g071580.2.1	Tomato	cytosol, mitochondrion, nucleus	72.28	64.04
KRH08687	Soybean	cytosol, mitochondrion, nucleus	65.35	59.46
EES09340	Sorghum	cytosol, mitochondrion, nucleus	60.4	45.52
KXG23047	Sorghum	cytosol, mitochondrion, nucleus	64.36	44.83
KRH35137	Soybean	nucleus	70.3	33.33
VIT_18s0072g00380.t01	Wine grape	plastid	68.32	33.01
KRG91659	Soybean	nucleus	69.31	29.41
PGSC0003DMT400017057	Potato	extracellular, nucleus	63.37	20.91
EES12155	Sorghum	nucleus	53.47	20.07

Protein Annotations

EnsemblPlants:EES12153	EnsemblPlantsGene:SORBI_3006G078400	EntrezGene:8073983	GO:GO:0006950	GO:GO:0008150	InterPro:ABA_WDS
PANTHER:PTHR33801	PANTHER:PTHR33801:SF7	PFAM:PF02496	ProteinID:EES12153	ProteinID:EES12153.1	RefSeq:XP_002447825.1
SEG:seg	unigene:Sbi.19717	UniParc:UPI0001A870C8	UniProt:C5YGE1	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr6:-:44407316..44408052

Molecular Weight (calculated)

11546.3 Da

IEP (calculated)

7.194

GRAVY (calculated)

-1.362

Length

101 amino acids

Sequence
(BLAST)

001: MAEEKHHHHL FHHRKEEESS GEVDYEKKEK HHKHLEQLGE LGTIAAGAYA LHEKHKAKKD PENEHGHRIK EEVAAVAAVG SAGFAFHEHH EKKDAKKHGH
101: N

Best Arabidopsis Sequence Match ( AT1G01540.2 )
(BLAST)

001: MSVYDAAFLN TELSKPTSIF GLRLWVVIGI LLGSLIVIAL FLLSLCLTSR RKNRKPRADF ASAAIATPPI SKEIKEIVPA QNQSVPAEIQ VDIGKIEHRV
101: VFSDRVSSGE SRGTASASET ASYSGSGNCG PEVSHLGWGR WYTLRELEAA TNGLCEENVI GEGGYGIVYR GILTDGTKVA VKNLLNNRGQ AEKEFKVEVE
201: VIGRVRHKNL VRLLGYCVEG AYRMLVYDFV DNGNLEQWIH GDVGDVSPLT WDIRMNIILG MAKGLAYLHE GLEPKVVHRD IKSSNILLDR QWNAKVSDFG
301: LAKLLGSESS YVTTRVMGTF GYVAPEYACT GMLNEKSDIY SFGILIMEII TGRNPVDYSR PQGETNLVDW LKSMVGNRRS EEVVDPKIPE PPSSKALKRV
401: LLVALRCVDP DANKRPKMGH IIHMLEAEDL LYRDERRTTR DHGSRERQET AVVAAGSESG ESGSRHHQQK QR

Arabidopsis Description

Probable serine/threonine-protein kinase At1g01540 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDL4]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.