Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003712_P001 | Maize | nucleus | 55.02 | 55.02 |
| EES00725 | Sorghum | nucleus | 20.45 | 54.46 |
| EES12153 | Sorghum | nucleus | 20.07 | 53.47 |
| EES06935 | Sorghum | cytosol, mitochondrion, nucleus | 20.45 | 51.4 |
| KXG23047 | Sorghum | cytosol, mitochondrion, nucleus | 27.51 | 51.03 |
| EES09340 | Sorghum | cytosol, mitochondrion, nucleus | 25.28 | 50.75 |
| GSMUA_Achr3P19130_001 | Banana | nucleus | 25.28 | 47.55 |
| GSMUA_Achr8P17320_001 | Banana | nucleus | 28.62 | 41.4 |
| TraesCS2A01G301500.1 | Wheat | nucleus | 40.15 | 40.91 |
| TraesCS2D01G300100.1 | Wheat | nucleus | 39.41 | 40.46 |
| TraesCS2B01G317600.1 | Wheat | nucleus | 40.15 | 38.71 |
| Os04t0423400-01 | Rice | cytosol, nucleus | 32.34 | 37.99 |
Protein Annotations
| EnsemblPlants:EES12155 | EnsemblPlantsGene:SORBI_3006G078500 | EntrezGene:8077593 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS |
| PANTHER:PTHR33801 | PANTHER:PTHR33801:SF6 | PFAM:PF02496 | ProteinID:EES12155 | ProteinID:EES12155.1 | RefSeq:XP_002447827.1 |
| SEG:seg | unigene:Sbi.18061 | UniParc:UPI0001A870CA | UniProt:C5YGE3 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr6:-:44420519..44422060
Molecular Weight (calculated)
28484.8 Da
IEP (calculated)
4.709
GRAVY (calculated)
-1.525
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEYGRSGY GRSGAGDDYD SGYNSKSRTD DYGRGEGGYN ESGGDDYGRR SGGDGYDRSG GDDYGRGTGG GGYNKSGKDD YDGGYNKSGT NDDEYGRRGT
101: GGGYNSKSSG DDAYTGGAGY NSKSSGDDDA YTGVGYNSKS SGDDAYTGGG YNRKSGGADD GEYGSSRDDD DSEMYRKEEK EHKHKEHLGE MGALAAGAFA
201: LYERHEAKKD PEHAQRHKIE EGVAAVAALG SGGFAFHEHH DKKEAKDAAE DAEEESGRGE GKKKHHFFG
101: GGGYNSKSSG DDAYTGGAGY NSKSSGDDDA YTGVGYNSKS SGDDAYTGGG YNRKSGGADD GEYGSSRDDD DSEMYRKEEK EHKHKEHLGE MGALAAGAFA
201: LYERHEAKKD PEHAQRHKIE EGVAAVAALG SGGFAFHEHH DKKEAKDAAE DAEEESGRGE GKKKHHFFG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.