Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus | 76.03 | 77.62 |
| GSMUA_Achr8P30340_001 | Banana | nucleus | 73.29 | 73.29 |
| GSMUA_Achr6P25740_001 | Banana | cytosol, mitochondrion, nucleus | 50.0 | 70.87 |
| Zm00001d004843_P003 | Maize | extracellular | 58.9 | 65.65 |
| EES09340 | Sorghum | cytosol, mitochondrion, nucleus | 58.9 | 64.18 |
| Os11t0167800-01 | Rice | plastid | 57.53 | 60.87 |
| Zm00001d023529_P001 | Maize | cytosol, mitochondrion, nucleus | 56.85 | 60.14 |
| KXG23047 | Sorghum | cytosol, mitochondrion, nucleus | 58.9 | 59.31 |
| TraesCS4B01G112000.1 | Wheat | cytosol, mitochondrion, nucleus | 53.42 | 56.52 |
| GSMUA_Achr3P19130_001 | Banana | nucleus | 54.79 | 55.94 |
| TraesCS4D01G109500.1 | Wheat | cytosol, mitochondrion, nucleus | 52.05 | 55.47 |
| GSMUA_Achr8P17320_001 | Banana | nucleus | 69.86 | 54.84 |
| TraesCS4A01G208400.1 | Wheat | nucleus | 45.89 | 50.0 |
| Zm00001d035409_P001 | Maize | nucleus | 39.04 | 34.13 |
| HORVU4Hr1G020030.3 | Barley | cytosol | 27.4 | 28.78 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P25730_001 | EnsemblPlants:GSMUA_Achr6T25730_001 | EnsemblPlantsGene:GSMUA_Achr6G25730_001 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS |
| ncoils:Coil | PANTHER:PTHR33801 | PANTHER:PTHR33801:SF9 | PFAM:PF02496 | SEG:seg | UniParc:UPI000294FE48 |
| UniProt:M0TA69 | MapMan:35.2 | : | : | : | : |
Description
abscisic stress-ripening, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G25730_001]
Coordinates
chr6:+:26765549..26766330
Molecular Weight (calculated)
16580.7 Da
IEP (calculated)
5.820
GRAVY (calculated)
-1.220
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEKHHHHF FHHHKEEEQP AEEQLTEEAV YSETAYSGGG DAYAETVVVA ESASDDYEKY KEEEKQHKHK EHLGKMGAVA AGAFALYEKH EAKKDEEHGH
101: RHKIEEEIAA AVAVGSGGYA FHEHHEKKEA KEEAEEASGK HHHHLF
101: RHKIEEEIAA AVAVGSGGYA FHEHHEKKEA KEEAEEASGK HHHHLF
0001: MTTTTTTTTR VASSSSTRNN RILKDANGDI GEHLRNHIHL TNCIHLKNNM HKQSPVLTDR ALMRDLIVLQ RSRSLRDPSA SPPAWNTPPS VVDLLPKKGD
0101: LVEGGRRSVD LKKSSRRLSA LSGSSPVVNF GTSKVTPSDE RSGPVSGERD SGRRVKREES SRKSYRIGDD YQNVNEVVSH GSGSKASRRL SRVNDAMVKT
0201: LSDQLNEVVV GDSDDVVSSN VRPRVRYGGG GGGGNTRGCA GGMSRPKRRK FRGTRRVRGK SRDTGGGKSE MSVASNTLPQ VEKHDGEKEG FGEQNMTKAC
0301: GIPFNWSRIH HRGKTFLDKA GRSLSCGMSD SKGGRKGETN ERNGSDKMMI QSDDDSSSFI GSDGEALPLL VDSGENDGWV HDYSGELGIF ADSLLKNDED
0401: SDLASEGRSG EKKHKKKSHV NARHRHRQQH QSLTEKYTPK TFRDLLGQNL VVQALSNAVA RRKLGLLYVF HGPNGTGKTS CARIFARALN CHSMEQPKPC
0501: GTCSSCVSHD MGKSWNIREV GPVGNYDFEK IMDLLDGNVM VSSQSPRVFI FDDCDTLSSD CWNALSKVVD RAAPRHVVFI LVCSSLDVLP HVIISRCQKF
0601: FFPKLKDADI VYSLQWIASK EEIEIDKDAL KLIASRSDGS LRDAEMTLEQ LSLLGQRISV PLVQELVGLV SDEKLVDLLD LALSADTVNT VKNLRTIMET
0701: SVEPLALMSQ LATVITDILA GSYDFTKDQH KRKFFRRQPL PKEDMEKLRQ ALKTLSEAEK QLRVSNDKLT WLTAALLQLA PDQNYLLQRS STADTGGRES
0801: SDHHLDPSSD AAGGRSSGLD RRRGDSRKNR PAVEEIWLEV IEKLRVNGLR EFLYKEGRIV SLNLGSAPTV HLMFSSPLTK STAEKFRSHI MQAFEAVLES
0901: PVTIEIRCET KKDPRNNVHH HHHHPTVKDK SLPQSLALIG HDYNIDGSGR SEIVEVTESN GQRRQQQKQQ EEERTEPVGS SALARARRKH LEASQSQNQS
1001: QSIVRGKVSL AHVIQQADGC SLQNGWSKRK AVSIAEKLEQ ENLRLEPRSR SLLCWKSSRG TRRKATRLKV RTRRARPHTL LKLVSCGKCL STRSPTR
0101: LVEGGRRSVD LKKSSRRLSA LSGSSPVVNF GTSKVTPSDE RSGPVSGERD SGRRVKREES SRKSYRIGDD YQNVNEVVSH GSGSKASRRL SRVNDAMVKT
0201: LSDQLNEVVV GDSDDVVSSN VRPRVRYGGG GGGGNTRGCA GGMSRPKRRK FRGTRRVRGK SRDTGGGKSE MSVASNTLPQ VEKHDGEKEG FGEQNMTKAC
0301: GIPFNWSRIH HRGKTFLDKA GRSLSCGMSD SKGGRKGETN ERNGSDKMMI QSDDDSSSFI GSDGEALPLL VDSGENDGWV HDYSGELGIF ADSLLKNDED
0401: SDLASEGRSG EKKHKKKSHV NARHRHRQQH QSLTEKYTPK TFRDLLGQNL VVQALSNAVA RRKLGLLYVF HGPNGTGKTS CARIFARALN CHSMEQPKPC
0501: GTCSSCVSHD MGKSWNIREV GPVGNYDFEK IMDLLDGNVM VSSQSPRVFI FDDCDTLSSD CWNALSKVVD RAAPRHVVFI LVCSSLDVLP HVIISRCQKF
0601: FFPKLKDADI VYSLQWIASK EEIEIDKDAL KLIASRSDGS LRDAEMTLEQ LSLLGQRISV PLVQELVGLV SDEKLVDLLD LALSADTVNT VKNLRTIMET
0701: SVEPLALMSQ LATVITDILA GSYDFTKDQH KRKFFRRQPL PKEDMEKLRQ ALKTLSEAEK QLRVSNDKLT WLTAALLQLA PDQNYLLQRS STADTGGRES
0801: SDHHLDPSSD AAGGRSSGLD RRRGDSRKNR PAVEEIWLEV IEKLRVNGLR EFLYKEGRIV SLNLGSAPTV HLMFSSPLTK STAEKFRSHI MQAFEAVLES
0901: PVTIEIRCET KKDPRNNVHH HHHHPTVKDK SLPQSLALIG HDYNIDGSGR SEIVEVTESN GQRRQQQKQQ EEERTEPVGS SALARARRKH LEASQSQNQS
1001: QSIVRGKVSL AHVIQQADGC SLQNGWSKRK AVSIAEKLEQ ENLRLEPRSR SLLCWKSSRG TRRKATRLKV RTRRARPHTL LKLVSCGKCL STRSPTR
Arabidopsis Description
Protein STICHEL-like 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JRP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.