Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus | 78.77 | 80.42 |
| GSMUA_Achr6P25730_001 | Banana | cytosol, mitochondrion, nucleus | 73.29 | 73.29 |
| GSMUA_Achr6P25740_001 | Banana | cytosol, mitochondrion, nucleus | 49.32 | 69.9 |
| EES09340 | Sorghum | cytosol, mitochondrion, nucleus | 57.53 | 62.69 |
| Zm00001d004843_P003 | Maize | extracellular | 56.16 | 62.6 |
| Os11t0167800-01 | Rice | plastid | 57.53 | 60.87 |
| Zm00001d023529_P001 | Maize | cytosol, mitochondrion, nucleus | 56.85 | 60.14 |
| KXG23047 | Sorghum | cytosol, mitochondrion, nucleus | 57.53 | 57.93 |
| TraesCS4B01G112000.1 | Wheat | cytosol, mitochondrion, nucleus | 54.11 | 57.25 |
| TraesCS4D01G109500.1 | Wheat | cytosol, mitochondrion, nucleus | 52.74 | 56.2 |
| GSMUA_Achr3P19130_001 | Banana | nucleus | 53.42 | 54.55 |
| TraesCS4A01G208400.1 | Wheat | nucleus | 46.58 | 50.75 |
| GSMUA_Achr8P17320_001 | Banana | nucleus | 63.01 | 49.46 |
| Zm00001d035409_P001 | Maize | nucleus | 40.41 | 35.33 |
| HORVU4Hr1G020030.3 | Barley | cytosol | 23.97 | 25.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P30340_001 | EnsemblPlants:GSMUA_Achr8T30340_001 | EnsemblPlantsGene:GSMUA_Achr8G30340_001 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS |
| ncoils:Coil | PANTHER:PTHR33801 | PANTHER:PTHR33801:SF9 | PFAM:PF02496 | SEG:seg | UniParc:UPI0001922DF0 |
| UniProt:M0TUY6 | MapMan:35.2 | : | : | : | : |
Description
abscisic stress-ripening, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G30340_001]
Coordinates
chr8:+:32442319..32443021
Molecular Weight (calculated)
16746.8 Da
IEP (calculated)
6.011
GRAVY (calculated)
-1.347
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEERHHHHL FHHRQEEEKP SEEVVYSETA YNPSGDDYTS GYTETAVAES ASDEFERYEK EEKHHKHKEH LGEMGALAAG AFALYEKHEA KKDPEHAHKH
101: KIEEEIAAAV GVGSGGYAFH EHHEKKDAEK EAEEASGQKH HHHHLF
101: KIEEEIAAAV GVGSGGYAFH EHHEKKDAEK EAEEASGQKH HHHHLF
001: MEAIKTFSPK FGFQISLSPR THLTPVRFPP TACPVKPANL VRLKATRALI RDPQESNRKF QKFPPSEWTN RFDSVSVDAS EMDALRKEID KIIPNVKKEL
101: MSSQGIESTK KKILMVYLLV SLGLAYHFED EIEECLKEGF ETIEEMMAGE DNLYTISIIF LVLRTYGHHM SSDIFQKFKG NDGNFKGCIS GDAKGLLALY
201: EAAQLRTTTE YIMEEALSFT SSNLELLAAD GRCPPHLSKH IRNALGLSQH KQMEVLVAVE YISFYEQEKD HDKILLKFAK LNFKLMQLHY LEELKVVTKW
301: YKEHDFASNL PPYFKYVIVE NHFFAITMYF EPKFSQKRIM LAKYFTVLVL LDDTCDRYAS LSEAESLTNS LERWAPDDAM DKQPHYLKFV FKFIMGCFEE
401: FERELASEGR SYSVKATLEE FKTIVKANFD FAKLAHTGHV PSFKEYMEVG EVEVGVCATL AGNLMCIGHI GDEGVYEWLK SRPKFLKAAS TYGRLMNDIA
501: GFEDDMKREY VITGVNTYMK QYGLTKMEAI RELQNLVEYN HTIMNEEFLK TTDLPRQIRK QVINVARSLN VSYTEGEGFT HTKGKVDEYI TSLFITPIRI
101: MSSQGIESTK KKILMVYLLV SLGLAYHFED EIEECLKEGF ETIEEMMAGE DNLYTISIIF LVLRTYGHHM SSDIFQKFKG NDGNFKGCIS GDAKGLLALY
201: EAAQLRTTTE YIMEEALSFT SSNLELLAAD GRCPPHLSKH IRNALGLSQH KQMEVLVAVE YISFYEQEKD HDKILLKFAK LNFKLMQLHY LEELKVVTKW
301: YKEHDFASNL PPYFKYVIVE NHFFAITMYF EPKFSQKRIM LAKYFTVLVL LDDTCDRYAS LSEAESLTNS LERWAPDDAM DKQPHYLKFV FKFIMGCFEE
401: FERELASEGR SYSVKATLEE FKTIVKANFD FAKLAHTGHV PSFKEYMEVG EVEVGVCATL AGNLMCIGHI GDEGVYEWLK SRPKFLKAAS TYGRLMNDIA
501: GFEDDMKREY VITGVNTYMK QYGLTKMEAI RELQNLVEYN HTIMNEEFLK TTDLPRQIRK QVINVARSLN VSYTEGEGFT HTKGKVDEYI TSLFITPIRI
Arabidopsis Description
TPS08Terpenoid synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:O65435]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.