Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005442_P001 | Maize | cytosol | 22.29 | 5.33 |
| Zm00001d019522_P001 | Maize | cytosol | 19.75 | 4.74 |
| Zm00001d051948_P001 | Maize | cytosol | 18.47 | 4.59 |
| Zm00001d018443_P001 | Maize | mitochondrion | 17.83 | 4.44 |
| Zm00001d021613_P001 | Maize | plastid | 16.56 | 4.23 |
| Zm00001d037614_P001 | Maize | cytosol | 7.64 | 3.7 |
| Zm00001d000437_P001 | Maize | endoplasmic reticulum, plasma membrane | 7.64 | 3.46 |
| Zm00001d008419_P001 | Maize | endoplasmic reticulum, plasma membrane | 7.01 | 3.1 |
| Zm00001d051347_P001 | Maize | endoplasmic reticulum, plasma membrane | 4.46 | 2.29 |
Protein Annotations
| EnsemblPlants:Zm00001d019332_P001 | EnsemblPlants:Zm00001d019332_T001 | EnsemblPlantsGene:Zm00001d019332 | GO:GO:0000469 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0042254 | InterPro:RRP36 | PANTHER:PTHR21738 | PFAM:PF06102 |
| ProteinID:ONM52716.1 | UniParc:UPI000220F2ED | UniProt:A0A1D6HWX1 | MapMan:35.2 | : | : |
Description
Ankyrin repeat family protein
Coordinates
chr7:-:28218881..28220336
Molecular Weight (calculated)
17371.8 Da
IEP (calculated)
4.728
GRAVY (calculated)
-0.346
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSLLEKYE VVEQIDPERA MDAEVVELID QAPTAPPTLS PTRSSARGDD FPFLLLVYSS CSAFLMCAPI LNPSLSIACP CRGVGAGEGI IDIMTLESGL
101: REDTHPMGAE LRESKLMNKY NELKEAGKLD GFMERRRRKN ASKDHLYMPY RWNGDGA
101: REDTHPMGAE LRESKLMNKY NELKEAGKLD GFMERRRRKN ASKDHLYMPY RWNGDGA
001: MKGAGKFEGS SSKIVFEDSE EDEDLSCSSV SSSDEEEETE KELTFEEIHK LRADGSKAVP WKPNQVKKTG RARANKNRPM EVSSKKPVSR YREVVHVPKK
101: EVRDPRFNQL GGTLDVEGFR KRYNFFFEDK LPVEREELKK KLKKTKNPEE IDELKNQLTY VEKMLKYEPS TQNKGAAILT EHKKKEREAA KEGKRPYYLK
201: KSEIRKQTLI EKYNSLKESG KLTSYLDKRR KKNATKDHRF MPYRRAEE
101: EVRDPRFNQL GGTLDVEGFR KRYNFFFEDK LPVEREELKK KLKKTKNPEE IDELKNQLTY VEKMLKYEPS TQNKGAAILT EHKKKEREAA KEGKRPYYLK
201: KSEIRKQTLI EKYNSLKESG KLTSYLDKRR KKNATKDHRF MPYRRAEE
Arabidopsis Description
At1g12650/T12C24_1 [Source:UniProtKB/TrEMBL;Acc:Q8W1E4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.