Factsheet for Zm00001d005442_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98424	Sorghum	cytosol	92.39	93.24
Zm00001d019522_P001	Maize	cytosol	91.93	92.35
Os07t0436100-01	Rice	cytosol	88.43	88.57
TraesCS2A01G237500.1	Wheat	cytosol	84.32	84.58
TraesCS2D01G236000.1	Wheat	cytosol	83.71	83.71
TraesCSU01G145200.1	Wheat	cytosol	83.41	83.66
GSMUA_Achr5P13140_001	Banana	mitochondrion	64.38	79.96
HORVU2Hr1G052030.1	Barley	cytosol	12.02	78.22
GSMUA_Achr4P26640_001	Banana	cytosol	71.23	77.87
GSMUA_Achr1P01140_001	Banana	cytosol	59.67	71.66
VIT_05s0136g00240.t01	Wine grape	cytosol	69.25	69.79
PGSC0003DMT400076190	Potato	cytosol	66.82	67.33
Solyc09g091560.2.1	Tomato	cytosol	66.67	67.18
KRG90233	Soybean	cytosol	65.14	65.95
KRH33461	Soybean	cytosol	64.38	65.18
CDY18256	Canola	cytosol	62.25	63.51
AT1G04780.1	Thale cress	cytosol	64.08	63.4
CDX89790	Canola	cytosol	60.73	62.93
CDX85149	Canola	nucleus, plastid	56.32	62.61
Bra015348.1-P	Field mustard	cytosol	61.95	62.23
AT3G24210.1	Thale cress	nucleus	56.77	61.45
CDY45348	Canola	cytosol	51.9	59.0
Zm00001d018443_P001	Maize	mitochondrion	54.19	56.42
Zm00001d051948_P001	Maize	cytosol	53.88	56.01
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	43.07	50.81
KRG90235	Soybean	nucleus	41.25	49.45
Zm00001d021613_P001	Maize	plastid	35.62	38.05
Bra015003.1-P	Field mustard	cytosol, plastid	55.86	32.89
CDX77466	Canola	plastid	53.42	32.71
Zm00001d000437_P001	Maize	endoplasmic reticulum, plasma membrane	12.48	23.63
Zm00001d037614_P001	Maize	cytosol	11.42	23.15
Zm00001d019332_P001	Maize	cytosol	5.33	22.29
Zm00001d008419_P001	Maize	endoplasmic reticulum, plasma membrane	11.72	21.69
Zm00001d051347_P001	Maize	endoplasmic reticulum, plasma membrane	8.83	18.95

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100280346	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	UniProt:B8A3B6	EMBL:BT056058	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	ProteinID:ONM21117.1	PFAM:PF11904	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SUPFAM:SSF48403	UniParc:UPI00019177A3	EnsemblPlantsGene:Zm00001d005442
EnsemblPlants:Zm00001d005442_P001	EnsemblPlants:Zm00001d005442_T001	SEG:seg	:	:	:

Description

Ankyrin repeat family protein

Coordinates

chr2:+:174337143..174340895

Molecular Weight (calculated)

73948.7 Da

IEP (calculated)

8.366

GRAVY (calculated)

-0.633

Length

657 amino acids

Sequence
(BLAST)

001: MAGVDVARHA HSPAHHAVAA RDHVALRRVL EALPPARRPE EIRTEADSVA EEARAEAVSA VIDRRDVPGR ETPLHLAVRL CDATATEMLM AAGADWSLQN
101: EQGWSALQEA ICAREEALAR VIVRHYQPLA WAKWCRRLPR VVAAMRRMRD FYMEITFHFE SSVIPFISRV APSDTYRVWK RGANLRADMT LAGFDGFKIQ
201: RSDQTILFLG EGSEDGKVPP GSLCMINHKD KEIMNALEGA GAPASEAEVQ QEVAAMSQTN IFRPGIDVTQ AVLLPQLTWR RQERTEAVGP WKAKVYDMNH
301: VLVSVKSRRV PGAMTDEEFF SSSNDNDTES EGFDDVLTEE EKKQLEAALK MDSPDAGGED QSDSFAGPRH SCFEPREREI PIEGMSVSGN VESKHDKKGW
401: FSNWGKRAQV SKPERVKKMA PPRSSLCVDE KVSDLLFESP SNAQTRPGRH SVDVVRADDN RRIRERDSRR YVPSAENGHR RKEGSKESEY KKGLRPVLWL
501: SPNFPLRTEE LLPLLDILAN KVKAIRRLRD LLTTKLPPDT FPVKVAIPVV PTIRVLVTFT KFEELQPLEE FGTPPSSPDK SKSPAVQPPS SSWIQWIKAP
601: YYRQMNLSTA PGPSSRVEDI HHQDPFAIPS DYVWTTPEEK KKKTQENKNR SKKGRNG

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.