CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45348	Canola	cytosol	77.16	78.89
AT3G24210.1	Thale cress	nucleus	79.7	77.59
GSMUA_Achr5P13140_001	Banana	mitochondrion	57.19	63.89
CDX89790	Canola	cytosol	65.14	60.73
VIT_05s0136g00240.t01	Wine grape	cytosol	66.84	60.58
CDY18256	Canola	cytosol	65.48	60.09
GSMUA_Achr4P26640_001	Banana	cytosol	60.91	59.9
GSMUA_Achr1P01140_001	Banana	cytosol	55.16	59.6
HORVU2Hr1G052030.1	Barley	cytosol	9.81	57.43
Zm00001d019522_P001	Maize	cytosol	63.45	57.34
EER98424	Sorghum	cytosol	63.11	57.3
Solyc09g091560.2.1	Tomato	cytosol	62.77	56.9
PGSC0003DMT400076190	Potato	cytosol	62.61	56.75
Zm00001d005442_P001	Maize	cytosol	62.61	56.32
Os07t0436100-01	Rice	cytosol	62.27	56.1
TraesCS2A01G237500.1	Wheat	cytosol	61.25	55.27
TraesCS2D01G236000.1	Wheat	cytosol	61.08	54.95
TraesCSU01G145200.1	Wheat	cytosol	60.74	54.81
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	46.87	49.73
CDY48669	Canola	nucleus	52.45	49.6
CDX86213	Canola	nucleus	52.45	49.52
KRG90235	Soybean	nucleus	45.69	49.27
CDX77466	Canola	plastid	89.0	49.02
CDY07249	Canola	cytosol, plastid	44.33	46.05
CDY24874	Canola	cytosol	44.67	44.75
CDY57011	Canola	nucleus, plastid	52.28	44.21
CDY00019	Canola	mitochondrion	52.28	44.02
CDY21008	Canola	cytosol	38.24	43.97
CDY31210	Canola	nucleus	38.24	43.55
CDX97982	Canola	cytosol, nucleus, peroxisome	41.62	38.5
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	40.95	25.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlants:CDX85149	ProteinID:CDX85149	ProteinID:CDX85149.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00142717001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0004EF479E
SEG:seg	:	:	:	:	:

Description

BnaC07g07570D

Coordinates

chrLK031840:+:1461345..1463256

Molecular Weight (calculated)

66001.5 Da

IEP (calculated)

9.028

GRAVY (calculated)

-0.570

Length

591 amino acids

Sequence
(BLAST)

001: MEGIDVSKYT HSPVHRAVAS RDHAALRSIL SSLPKPRDPS EIQSESDSLS EEATSDAISA VIDRRDVPRR DTPLHLAVKL CDATSAEMLM VAGADWTLQN
101: EDGWNALQEA VCSRQESIAM IIVRHYQPLA WAKWCRRLPR LVATMRKMKD FYLEMSFHFE SSVVPFVSKV APSDTYKVWK VGSNLRADMT MAGFDGFKIQ
201: RSDQSILFLG DGSEDGKVPR GSLYMVNHKD KEVMNALDGA SSVASDEDVK KEVAAMCRSN IFRPGIDVTQ AVLNPQTNWR RQEKSEMVGP WKAKVYEMNN
301: VVVSIKSRKV PGSSSDKENG GGDDELCDVL TDEEQKQLEA ALKLDLPEFP NVDSENGWLG GWRKKEATMI KQEKEIKYAP PRSSLCVNEK VSNLLGDTNQ
401: IKPGRHSVDN DHIRKPRVSS KSHQESEYKK GLRPVLWLST NFPLQTEELL PLLDILANKV KAIRRLRELL TTKLPAGTFP VKVAIPVVPT IKVLVTFTKF
501: EEVDPADEFK TPPSSPTATS GYESPADFTN ASSSSWFRRA RSNKDGSSKK SQTMQDPFAI PAGYTWVSAE SKKKKPDTQK VKKGKKTEQV S

Best Arabidopsis Sequence Match ( AT3G24210.1 )
(BLAST)

001: MENVDVSKYI HSSVHKAVAS KDYVGLRAIL SSLPKPKDPC EIQTEAASLS EEAKSDTISA VIDRRDVPSR DTPLHLAVKL CDSTSVEMLM VAGADWTLQN
101: EDGWNALQEA VCSRQEAIAM IIVRHYQPLA WAKWCRRLPR LIATMSKMKD FYLEMSFHFE SSVVPFVSKV APSDTYKVWK VGSNLRADMT MAGFDGFKIQ
201: RSDQSILFLG DGSEDGEVAR GSLYMVNHKD KEVMNALDGA CGVPSEEEVR KEVAAMCKSN IFRPGIDVTQ AVLSPQTNWR RQEKSEMVGP WKAKVYEMNN
301: VVVSVKSRKV PGSLAVEGGD DDICDVLTDE EQKQLEDALK LDLPDFPNVN GENGFIVHHQ EDHVEANKKA EKKGWLGGWR KKETKQEKQI QYAPPRSSLC
401: VNEKVSNLLG ESNQIKPGRH SVDNEHYRKP KALVSDKTRH ESEYKKGLRP VLWLSPNFPL QTEELLPLLD ILANKVKAIR RLRELLTTKL PSGTFPVKVA
501: IPVVPTIKVL VTFTKFEEIE PVDEFKTPLS SPTSSGYESP AAATTDFTNS SSSSSWFRRS RSNKDGGSSK SKTLQDPFAI PTGYTWVSLE SKKRKPKKGG
601: KKTEQVS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4J6I7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.